Leuresthes tenuis (California grunion): 140314539
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Entry
140314539 CDS
T11698
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04142
Lysosome biogenesis
ltu04144
Endocytosis
ltu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140314539
04142 Lysosome biogenesis
140314539
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140314539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ltu04131
]
140314539
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ltu04147
]
140314539
Membrane trafficking [BR:
ltu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
140314539
Exosome [BR:
ltu04147
]
Exosomal proteins
Proteins found in most exosomes
140314539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
140314539
NCBI-ProteinID:
XP_072248905
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVIFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLEE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASDSLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQAYGYGYTAAAAPGYAQPPQA
SFGYGM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacttgggcatc
aacccggccaacattggctttagcactctaactatggagtccgacaagttcatctgcgta
cgggagaaagtgggcgagcaggcccaggtcgtcatcattgacatggccgaccccaacaat
cccatccgcaggcccatctctgccgacagcgccatcatgaacccggcgagcaaagtcatt
gcccttaaagctgcaaagaccctgcagatctttaacattgagatgaagagcaagatgaag
gcgcacacgatgacagatgatgttactttctggaagtggatatccctcaacaccgttgcc
ctggtcacagacaatgcggtctaccactggagcatggagggtgactctcaaccaatcaaa
gtcttcgaccgtcactccagcctggcaggctgccagattatcaactaccgcaccgatgcc
aaacagaagtggttgctgctcattggcatttcagcgcagcaaaaccgtgttgttggagcc
atgcagttgtactctgtggacaggaaggtgtctcagcctattgagggccatgctgctggc
tttgcacagttcaagatggaaggcaacaccgaagagtcgaccctgttttgctttgctgtg
cgcggacaggcaggaggcaaacttcatatcattgaagtggggactccaccaactgggaac
cagccatttccaaagaaagctgtggatgttttctttcccccagaagcccaaaatgacttc
cctgtggccatgcagatcagttccaagcaagatgtcgtctttctcatcaccaaatacggc
tacatccacctgtatgacttggagactggaacttgcatctacatgaacaggatcagtggg
gagaccatttttgtcacagccccccacgaacccactgctggtatcatcggagtaaacaga
aaaggacaggtgctgtcagtgtgcgttgaggaggagaacatcattccctacatcactaat
gtgctccaaaacccggacctggcgcttcgcatggctgtacgcaacaaccttgccggtgct
gaggagcttttcgctcgcaagttcaacactctctttgcagcagggaattactcagaagct
gctaaggtagcagccaatgcacccaagggtattctgcggaccccagacacaatccgaagg
ttccaaagcgttccagcccaaccaggccagacttcacctttgctccagtactttggcatc
ctgctggaccaaggccagcttaataagtttgagtctctggagctgtgcaggcctgttctt
cagcaaggccgcaaacagctactggagaaatggctgaaggaagacaagctggaatgttct
gaggagcttggagacttggtgaagtctgtagatcctactctggccctcagtgtctacctg
agagccaacgtccccaataaagtcattcagtgctttgcagagactggacagttccagaag
attgtcctttatgccaaaaaggtgggctacaccccagactggatctttctgctcaggaac
gtaatgcggatcagtccagagcagggcctccagttctcccagatgctggttcaggatgaa
gagccccttgcagacattacacagatcgttgatgtgttcatggagtacaacctgatccag
cagtgcacatccttcctgctcgatgccctgaagaacaacaggcccatggaaggaccactg
cagacgcgtttgctggaaatgaatttggtccacgcaccacaggttgcagatgccatcctg
ggcaatcagatgttcacccactacgatcgcgcccacgtggcacagctgtgtgagaaggct
ggtctcctgcagagggcactggagcattacactgatttgtatgacataaagcgcgctgtg
gtgcacacacaccttctcaatccagagtggctggtgaatttctttggctccctctcggtt
gaggactctctggagtgtctgagggccatgttgtctgccaacatccggcagaacctgcag
atctgcgtgcaggttgcctccaagtaccacgaacagctttcaactcaatccctcactgaa
ctttttgagtcattcaagagcttcgagggtctcttctacttcttgggttccattgtgaac
ttcagccaggatccagaggtccacttcaagtatatccaggcagcctgcaaaacaggccag
atcaaagaggtggagagaatctgcagagagagcaactgttacgatcctgagcgtgtgaag
aacttcctcaaggaggccaagcttaccgaccagctgcctttaatcatcgtgtgtgaccgc
tttgattttgttcacgacctggttctgtacctttatcgcaacagcctgcagaaatacatc
gagatctatgtccagaaggtgaacccaagccgtctgccagtagtcattggagggttattg
gatgtggactgtgctgaggatgtgattaagaacctgatcttggttgtgagaggacagttc
tccacagatgaacttgttgctgaagtggagaaaagaaatcgactgaagttgttgctgccc
tggctggaggctcgtattcacgaaggctgtgaggagcctgcaacccacaacgctttggcc
aagatctacatcgacagcaacaacaaccctgaacgcttcttaagggagaaccccttctat
gacagccgcgtggtgggcaagtattgcgagaagagagacccccacctggcctgcgtggct
tatgaacgaggacagtgtgaccaggaactcattcatgtgtgcaatgagaactcgctgttc
aagagtctgtctcgataccttgtgcgtcgcaagaacccggagctgtgggcaagcgtgctg
ctggagaccaacaactacagaaggccactcattgaccaggttgtccaaacagccttatcg
gagacccaggatccagaggaagtgtctgtcacagtcaaggccttcatgactgccgacctt
cccaatgagctcattgagcttttggaaaagattgttctggacaattctgtcttcagcgag
cacagaaacctccagaatctgctcattctgacagccattaaagctgatcggacacgtgtt
atggagtacattaaccgtctggacaactacgacgcccctgacattgctaacatcgccatc
agcaacgagctgtttgaggaggcttttgctatttttaggaaattcgatgtcaacacctct
gcggtgcaggttctgattgaacacattggcaacctagacagagcttatgaatttgcagag
cgctgcaatgagcccccagtgtggagtcagctggcaaaggcccagcttcagaagggtctg
gtcaaagaggcgatcgactcttacatcaaggccgatgacccctctgcttacatggaggtg
gggcaggctgcagcccaaagcgggaactgggaggacctggtgaagtttctgcagatggcc
cgtaagaaggcccgcgagtcatacgttgagacggagctgatctttgccctggccaagacc
aaccgcctggctgagctggaagagttcatcaatggtcccaacaatgctcacattcagcaa
gtgggtgatcgttgctatgacgacaagatgtacgaagcagccaaactgctttacaacaac
gtgtccaattttggccgtctggcttccacgctggtgcacctgggagaataccaggcagct
gtggatggagcccgcaaagccaacagcacccgcacctggaaggaggtgtgttttgcttgt
gtggatgggaaggagttccgtcttgcccaaatgtgtggcctgcatattgtcgtccatgcc
gatgaactggaggaactcatcaactactaccaggaccgtggttattttgaagaactgatc
accatgctggaggccgctctggggctggaacgtgctcacatgggcatgttcaccgagctg
gcaatcctgtactccaaatttaaaccccagaagatgagggaacacctggagctcttctgg
tcccgtgtcaacattccaaaggttctcagggcagctgagcaggcccacctctgggcagag
ctggtgttcctctatgacaagtatgaggaatatgacaatgccatcatcaccatgatgaac
catccagctgatgcctggaaggagggccagttcaaagacattgtcactaaagtggcgaac
gttgagctgtactacaaggccgtccagttttatctggagttcaaaccgttgttgctgaac
gacctgctcatcgttctctctcctcgactggatcacacccgcgccgtcatcttcttcagc
aaggtgaagcagctgcccctggttaaaccttacctcaggtctgtccagaatcacaacaac
aagtcagtgaatgaggcgctgaacaacctcttcatcactgaggaagactatgcggcgctg
cgtacatccatcgacgcgtacgataacttcgacaacatctcgctggctcagggcctggag
aagcacgagctgatcgaattcaggaggatcgcagcgtacctttttaagggcaacaaccgc
tggaaacagagtgtcgagctctgcaagaaggacaagctctataaggacgccatgcagtac
gcatcagagtccaaagacaccgagctggcagaggagctcctggcttggttcctagaggaa
gacaagaaggagtgttttgccgcctgcctattcacctgctacgacctgctgcggccagat
gtggtgctggaaaccgcctggcgacacaacatcatggacttctccatgccatacttcatc
caggtcatgagggagtatctctcaaaggttgatgcgataaaggaaaaggtggacaaactc
gaagcctcggattctctgaggaaacaggaggagcaggctacagagtctcaacccattgtt
tacggcacaccgcagctcatgctcacagcgggacccaacgtggccgtgcctcctcagcag
gcgtacggctacggctacacggcagcagcggcgccaggctacgcccagccgccacaggcc
agcttcggttacggcatgtga
DBGET
integrated database retrieval system
