Leuresthes tenuis (California grunion): 140316040
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Entry
140316040 CDS
T11698
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ltu Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ltu03000
]
140316040 (prdm1a)
Transcription factors [BR:
ltu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
140316040 (prdm1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
140316040
NCBI-ProteinID:
XP_072249822
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MCGWDQSHTATSHSSAMLTSEGAHTMEQDDTHYKAKMDSTATSTSSDGAETMTDTDVDVE
MEEADMTHWTEPEFEEKCTYIVKDTPWEAGPDSDAVMMTTTRAEASLPRNLAFKHLASSK
EVVGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYVDEEFHHFVDGLDETRS
NWMRYVNPAHSASEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLRYPPSGEL
MMQKLKQSLLEVKQQQVSSEEHFVEASSPSPAAVTPTQPKREHSVLSILSGTHSTSTSSS
TKREPSRPLPTRPRCADSPERLLYPRALYPALRPHPHISEDFLSRKHGRLGYASTHSPGN
QSSATPSPSARSSPDSSPQGSPSGPAPSPASFYSPGLGSYPGYSPPSAPLSSPFYPQGTP
YSRYLLPHHYPLPGGGVPTVGGIFPRMYSPYSSLLPLHVPLLPSDTAGRRFLMPEHVHPT
SISAHRDIFLPGPTSAFSAATSLRDKAGPHNSYHGHSNPHGPAHAPSSGSPTAGTAPPSE
QVPTKPTSALLGNTSEHRSDEEAINLTKVKRGTCSAGYKALPYPLKKQNGKIKYECNVCS
KTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFS
STSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCS
LRLHMKGYCLAANSSSGSPSVPSQAALEEVHRANEEIERFDISEHAERLEQLQGGVEMDA
MLEKQVLGMVWRETDLNSPHFHPHHKSSATELLSAGYGPYESQNETSVIKIRHSSPIPPL
PANITVKQESDDDA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagtcacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacacacattacaaagccaagatggactccaca
gccaccagcacaagctcagatggagccgagacgatgaccgacacagatgtagatgttgag
atggaagaggcagacatgacacattggacagaaccagagttcgaggagaagtgcacatac
attgtcaaagacacgccgtgggaggcggggccagacagtgatgctgtgatgatgacgaca
accagagcagaggcatcgctgccccgaaacttagccttcaaacacctggccagcagcaag
gaggtggttggtgtctgcagcagggagtacatccccaaaggaactcgcttcggacccctg
gtaggggagatctacacagccgacagcgtccccaaagacgctaaccggaagtacttctgg
aggatctatgtggatgaggagtttcaccactttgttgacggcttggatgagacgcgctct
aactggatgcgatatgtgaacccggcccactcagcatcggagcagaacctggcggcgtgt
cagaacggcatggagatttatttctacactgtgaaacccgtccctgctggtgcagagctg
ctcgtgtggtactgccacgacttcgcccgacgcctgcgatacccaccgtcaggagagctg
atgatgcagaaacttaagcagtcacttttggaagttaagcagcagcaggtgagcagcgag
gagcactttgtcgaagcatccagcccgtctcctgccgcagtgacccctacacagcccaag
agggagcatagtgtcctctccattctgagtggcacccacagcacctcaacctcttcatca
accaagagggagcccagtcggcccctccccacccgccctcgctgtgctgacagcccagag
cgcctcctgtacccccgtgccctctacccggctctcaggccccaccctcacatctctgaa
gacttcctcagccgcaaacatggccggcttggttatgcctccactcattctcctggtaac
cagtcttcagccacacctagtccatctgcaaggagcagcccagacagcagccctcagggg
agcccgtctgggccagcaccatcacctgcttctttctactcccctggactgggttcttac
cctggttactccccaccatctgcccccctctcctcacccttctaccctcaagggaccccc
tactcacgttacctcctaccccatcactatcctctgcctggcggtggcgtcccgactgta
ggagggatcttcccaagaatgtattccccatacagcagccttttgccccttcatgttcct
ctccttccttctgacacagcagggaggcgcttcctaatgccagaacatgtgcatcccacc
tccatctcagcccacagagacatcttcctccctgggcccaccagtgccttctcagctgct
acttctctgagagacaaagcagggcctcacaactcttatcacgggcactctaacccacac
gggccagctcatgctccctccagcggctccccaacagcaggcacagcacctcccagtgag
caggtgcccactaagcctacctcagccctgctgggcaacactagcgaacatcgttccgat
gaagaggctataaacttgaccaaagtcaagcgtggcacatgctcagcgggctacaaggct
ctgccttatcctctgaagaagcagaatggcaaaatcaaatatgagtgcaatgtgtgcagt
aagactttcgggcagctgtcaaacctgaaggttcatcttcgtgtacacagtggagagagg
cccttcaaatgtcaaacctgtaacaaaggcttcactcaactcgctcatctgcaaaaacac
tacctggtccacactggagagaagccacatgaatgccaggtttgtcacaagcgcttcagc
agcaccagcaacctgaaaactcacctgcgtcttcactccggggagaagccctaccactgt
aaactctgccccgctaagttcacccagtttgtccacctcaagctacacaagcgcctacac
tcccgtgagcgaccacataaatgcccccactgtcatcgccattatatccacctgtgtagc
ctgcgtcttcatatgaaggggtattgcctggcagcaaattccagctctgggagtccatct
gttcctagccaggcagccttggaggaggtgcatcgtgccaatgaggagatcgagcgcttt
gacatcagtgagcatgctgagcggctcgagcagctgcaaggaggggtggagatggacgcc
atgttagagaagcaagtcttggggatggtatggagggagactgaccttaattccccccat
ttccacccccaccacaaaagtagtgccactgagcttttgtctgcaggttatggcccgtat
gagtcccagaatgagacgtcggtcatcaagatacggcacagtagccccatcccaccactt
cctgcaaacattactgtcaagcaggagtcagatgatgatgcttaa
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