KEGG   Leuresthes tenuis (California grunion): 140316223
Entry
140316223         CDS       T11698                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ltu  Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ltu03400]
    140316223 (mdc1)
DNA repair and recombination proteins [BR:ltu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    140316223 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 140316223
NCBI-ProteinID: XP_072250065
LinkDB
Position
Unknown
AA seq 2092 aa
MDATQVISNSILESEEEENEEENQNKGRPMAKLCILKNPHIPETDLPLFLGDNVLGRDPS
TCTLPFPAPSVSKQHATICISVYKRRGCHGDVGMEALVWDLGSMNGTRKGRLKLTPNVRY
ALSEGDSLVVADIPCQYVSCAADSIFSQDDMRTPGSRNSGVKVRLPDALGEGWGDTSTGS
KKYVSGGAKARVSLKRTPVSGSCLSFEQTPTQPQGTLVPQSDSDSDSERGGRGEKRRKAL
VSDSDSHKSSPSSCPSSAFLSPADKIVPESEDESPITPSSSSRNGSYRHVSFSTEETDLD
VGRQQLEKKRAPAILGNCLKEEEREVQGETNSKESQQPVKPEGNVSLTGESPVSTSEASK
DAIPAFNMDSDTDVDLEEEEAASAGPLCSNTNQQTDQPPNTVHFHMDSDTDVDEDADVSD
KAPKRIPSSNDTKPSHVASVIHPEGITMDSDTDVDDDAALSDAAAKDTSFQDAHTADTAS
SVQLRDFHLDSDTDVDEEVEGNCETVNKNSTKDETPIKLDMKLIVPECAPVAPHSLHLDS
DTDDEAVPAPVIGEPSAPAPVTKSCATADAGADLDIMSDSDTDEKDDSPLGVPVAVSNLP
ACPGTTSEALRSDSDANTDVDESIVSPAGDRVNPADFRLDSDTDVEDKEEEDHIPDLQRE
NTLRLLVPHQQNCSIPAQISEEEVEEMETQAFISPSSGAFRQPVGLSSCSDSQVDSDFLV
AETQSFILQTRDCQTRTDPTKASAVASPGDKIDEQTSRGCSFQLGLSDSSHLQSQGTALA
MENTQAFVSVERGVKLEETQAYVAVSTADRTSAENDSNLSATQAYGEDEELAGDSEVSEK
EACADFALEATQSYISEHCSDPENDSDEQERQNAAVIETLPSGSPTSSTLATAETNNPVC
SVQAVKTTTQAERREKEDNGKAAQPQHLTEDQSVTETQPLCASDSEEGDDEGSFPGPRKR
MAKPLQLEEEQTQPLTCSLAETQPMVFCEDDESDEEDSMLIPRKRKAKRLHLEEEETQQL
TNSELSTAETQPMAVSEDEDTDSMPGPRKRKAKPLQFEDETQSLANSEVSAAETQALSEC
GGEQINKDDMNPCPQKRKAKPLQLEERHTQPLISPEVSGVQIHSVLTGEDKKSDDEDSIP
GPQKRKAKQLHIEEDETQKLTDSELSTVEVQPVVPCEDKDSMSGQQTQALTTTEVSESQS
KVRDEESDGEDSHSRPQKRKAKRVHLEEGETQPLSNSEVCTAETPLKAKTPETSGVSLTK
SRETRARLREGEEEPQCCIPPKRRSRMESKTLTSTRGRRGKARSDDDTTEEQMKPVKQTR
GRRNARQGVDDDEDNERKSPIKEQKDEKLEEIAVSELREQEREAVKERRETAEQERLQAE
DAERVKIELERVERENKEKEEREVKERLEREEKERLERKRKEQEQKESLETAKREQEERL
ARERKEQQTRREIEEREKLEKEKHSKESQENEEEKEKPKAPARGRGAAKRTIAAQSTAEP
EQDSTPANNDFPASRTRSRSNSSNSVSSEMSIPGVNTQDSKRGGRGRGAKRSSETPKTTT
VRSSRRRMTVAAEPTEHSSNDNRAQELLSRPNSENSVSSEISSCSVNTQNRGRGGRQRGR
GRKTEPVLGTIDPVVSESHQSSTVRDRRSRRTKGSSSEALHEDEKERADSQQAGTSRGRQ
RANASGSEPAASNDEGQLNQEEGLADEKSHLPQRNVRGRGQKAVKTETVGPAVSEGDAVR
KQRKGRKSQMEANTGVDSAKGEERAQKTQTAEEEIPSAVRVRRTGRSSSTLVKNNAKESF
PEEEVEDGEKMEVETPKKKVRGQTSATSMNQDANVEASEPQTPTGVFSRKRHTPAGSSPV
AKTPRSSFASPAASGRVRAGGQAYKVLFTGVVDEEGERVLARLGGSMAKGVADMNCLVTD
KVRRTVKFLCAVAKGIPVVTTDWLEKSGKAGSFLSPSAFVVTDPEQEKKFSFRLQDSLRT
ASTQPLLQGYEIHVTKSVKPEPVHMRDIISSSGATFLPKMPSSHKPQTVVISCEEDWRLC
GPAVSASLPVVTAEFILTGILQQKLDFRTYVLSPPTATLQPAGGRGRGRRRT
NT seq 6279 nt   +upstreamnt  +downstreamnt
atggatgctactcaggtgatcagtaactcaatcttagagtcagaggaggaggaaaatgaa
gaggagaatcaaaataagggtcgaccgatggctaaactgtgcatcctaaaaaacccacac
atcccagagaccgatttgcccctcttcttgggagataatgtgctgggacgtgaccccagc
acctgcaccctgccctttcctgcaccctcagtgtccaagcagcatgcgaccatctgcatt
tctgtctacaagagaagaggttgtcacggtgatgtgggcatggaggccttggtttgggat
ctcgggagcatgaatgggacccgtaaaggccgcttaaaactgactcccaatgtacgctat
gcccttagtgaaggtgacagtttggtggtggcagacatcccgtgccagtatgtgagctgc
gctgcagactcaatcttttctcaagatgacatgaggactccagggagcagaaattcagga
gtaaaggtcaggttgccagatgctttaggagagggatggggtgacacgagcactggcagc
aagaaatatgtcagtggcggtgcaaaggcaagggtgtcgttaaagaggactcctgttagc
gggagttgtctgtcctttgagcaaactccaacccagccacaggggacattggtcccacaa
tctgactctgattcagacagcgaaagaggtggaagaggagagaaaaggaggaaagcccta
gtgtctgactccgactcccataaatccagccccagctcttgtcccagctccgccttctta
agtcctgcagacaaaatcgtccctgaaagtgaagatgaaagtcccattactccgtcctcc
tccagcagaaacgggtcatacagacatgtcagtttcagcacagaggaaacggatttagat
gtgggccgacagcagctggagaaaaaaagggcacctgcaatactgggaaactgtttaaag
gaagaagaaagagaagtacaaggagaaaccaattctaaagaaagtcaacaacctgtgaaa
cctgaaggcaacgtcagtcttacaggtgaatcacctgtgtctacatcagaagcatccaaa
gatgccattcctgcgtttaacatggacagcgacactgatgtggatttagaggaggaagag
gcggcatctgctgggcctctgtgctcgaatacaaatcaacaaactgatcaacccccaaac
acagtccattttcacatggacagtgacacagatgttgatgaggatgctgacgtttcagac
aaagctcctaaaaggattccttcctctaatgacactaaaccgtcccacgttgcttccgtt
attcaccctgaaggcatcaccatggacagtgacactgacgtggatgacgacgctgctttg
tcagatgctgccgccaaagacacatcattccaggatgcacacacagctgacactgcttct
tcagtgcagctgagagatttccacttggacagtgacaccgatgtcgatgaggaagtagag
gggaattgtgaaacagtaaacaaaaactctacaaaagatgaaacacccatcaaattggat
atgaagcttattgtgccggagtgtgccccggtcgctcctcacagcctgcatctagacagt
gacacagacgatgaagctgtccctgcccctgtcattggtgaaccctcggcacctgctcct
gtcacaaaatcatgcgccactgcagatgcaggcgctgatttggacattatgtcggacagt
gacacagacgagaaggatgattctcctctgggtgtacctgttgcagtctcaaacttgcca
gcatgtcctggtacaacgtcagaagctcttaggtcagattctgatgcaaacacagatgtg
gatgaatccatcgtgtcccccgctggagacagggtcaatccagctgacttcagactggac
agtgacaccgatgtggaggataaggaggaagaggaccacattcctgacctgcaaagagaa
aatacgttgaggttgctggttccccaccagcagaactgttccatccctgcacagatatca
gaagaagaagtggaagagatggagactcaggctttcataagcccctcttcaggtgcattt
agacagcctgtgggattgtcttcctgctcagacagccaggtggacagcgactttcttgtg
gctgagacacaatccttcattctacagacaagagattgccagacacgcacagatccaacc
aaagcctctgcagttgcgtcccctggtgacaaaatagatgagcagaccagcagaggatgc
tctttccagctgggattgtctgacagcagccacctgcaaagtcaaggcactgctctagcc
atggagaacacccaggcttttgtcagtgtggaaaggggagtaaagctggaagagactcag
gcatatgtagccgtatcaactgcagacagaacctctgcagagaatgactccaacctgtca
gccactcaggcctatggagaggatgaggagctggccggagattcagaagtgtctgaaaaa
gaagcttgtgcagattttgctttagaagcaacacagtcttacatttcagagcactgcagt
gatccagaaaatgattcagatgaacaggagagacaaaacgcagctgtgattgagactctg
ccctcaggttctcccacctcatcaacacttgccacggctgaaacaaataatcctgtttgt
tctgtccaagcagttaagaccacaacacaggctgaaagaagagagaaggaggacaatggg
aaggcagcacaaccacagcacctcactgaagatcagtctgtaactgaaactcagccctta
tgtgcaagtgacagtgaggaaggcgatgatgaaggctcatttccaggtccccgaaaaaga
atggcaaagccactgcagctggaagaagaacagacacagcccctaacttgttcacttgct
gaaactcagccaatggttttctgtgaagacgatgaaagtgatgaggaagattcaatgctg
atcccacgaaaaagaaaagcgaagcggcttcatcttgaagaagaagagacgcagcagctc
acaaattctgaactcagcactgctgaaactcaaccaatggctgtaagtgaggatgaggac
acagactcaatgccaggcccacgaaaaagaaaagcaaagccgctacaatttgaggatgaa
acacagtcactcgctaactctgaagtgtctgcagccgaaactcaggctttgagcgaatgt
gggggtgagcaaataaacaaagatgacatgaatccatgtcctcaaaaaagaaaagcaaag
ccactgcagcttgaagagaggcatactcagccgctcatcagtcctgaagtctctggtgtt
cagattcattcagtactgacaggtgaagataagaaaagtgatgatgaggactcaattcca
ggtccacaaaaaagaaaagctaaacaacttcatattgaagaagatgaaacgcagaagctc
acagattctgaactctctactgttgaagtgcagccggtggttccatgtgaagataaagac
tcaatgtcaggccaacagacgcaggccctcactactactgaagtctctgaaagtcagtca
aaagtgagagatgaggaaagtgatggtgaagactcgcattcacgtccacaaaagagaaaa
gcaaagcgggtccatctggaagaaggggagactcaaccactctcaaattctgaagtctgc
acagctgaaactcccttgaaagcaaaaactcctgaaactagtggagtcagtcttacaaag
tcaagagagacgagggcaagattaagagaaggggaagaggagccacagtgttgcatacct
ccaaagagacggtcaagaatggaaagtaaaactctgacgagtacaagaggaaggagagga
aaagctcggtctgatgatgataccactgaggagcagatgaagccggttaagcagacaaga
gggagaagaaatgcaagacaaggggtagatgatgatgaagataatgaaaggaagagtccg
ataaaggaacaaaaagacgagaaactggaagagattgctgtttcagagctcagagaacaa
gagagagaagctgtgaaggagagaagggagactgcagaacaagaaagactgcaggctgaa
gatgctgagagagtgaaaattgagctggagagagtagagagggaaaataaggagaaggaa
gaaagggaagtgaaggaaaggttggaaagagaggagaaagaaagattagaaaggaaaaga
aaggaacaggagcaaaaagaaagtttggaaacagcaaagagggaacaagaagagagactt
gcaagggagaggaaagaacaacaaactaggcgggaaatagaagaaagagagaaactggag
aaagaaaaacactcaaaggaatcacaagagaacgaggaggaaaaagagaagcccaaagct
cctgcaagaggtcgaggagcagccaaaagaacgatcgctgcccaaagcacagcagagccg
gaacaagactcaaccccagctaacaatgacttcccagcaagtagaaccagatctcgctca
aactcctccaactcggtcagctcagagatgtccatcccaggtgtcaacacccaggatagc
aagcgaggaggccgagggagaggagcaaagaggagcagtgagacacccaagacaaccact
gtgagaagcagccgccgaaggatgacggtggctgctgagccaacagagcacagcagcaac
gataaccgcgctcaggaactcctctccaggccaaattcagaaaactctgttagctctgag
atttccagctgcagtgtgaacactcaaaacagaggaagaggaggaaggcagcgaggaaga
gggaggaaaacagagcctgtcctgggtaccattgatcctgttgttagtgagagccatcag
agttctacagtgagggacaggaggagccggaggacgaaggggtcctccagtgaggctctc
catgaggatgagaaagagagggcagactctcagcaagctggtaccagtagggggcggcag
cgagccaatgcaagtggatctgaacctgcagcttcaaatgatgagggacagttaaatcaa
gaagagggacttgctgatgagaagtcacatttgcctcagaggaatgtcaggggcagaggt
caaaaagcagtaaagactgaaactgtggggcctgcagtcagtgaaggcgatgctgttaga
aaacaaagaaaaggaaggaagagtcagatggaggcaaatactggagtggatagtgccaaa
ggagaagaaagggcacaaaaaacacaaacagcagaggaagagattccctctgctgtccga
gtaaggagaacaggtagatcatccagcactctggtaaagaataacgcaaaagagtctttt
cctgaagaggaagtggaagatggtgagaaaatggaggtggagactcctaagaagaaagtc
agaggtcagacatcggcgacttccatgaaccaggatgcaaatgtggaggcgtcagagcca
cagacgccaaccggcgttttttcccggaagcgacacacacccgcaggctcctctcccgtg
gcaaaaactcctcgctcctccttcgcttccccagcggcgagcggtcgcgtacgagctgga
ggccaggcctacaaggtgctgttcacaggggtggtggatgaagaaggggaacgagtgctg
gctcgtttaggaggcagcatggctaaaggcgttgcagacatgaactgtcttgtgaccgat
aaggtgcgaaggacggtcaaattcctgtgtgcggtggccaaaggtatcccagttgtcaca
acagactggcttgaaaagagtggtaaagctgggagcttcctttctcccagcgcatttgtt
gttactgatccagagcaggagaagaagttcagtttccgcctgcaggattctctgaggact
gcaagcactcagcctctcctacagggttatgagatccatgtcacaaagtctgtaaagcca
gagcccgttcacatgagagacatcatttcctccagtggagcgacctttctaccaaagatg
ccttcgtctcataagcctcagaccgtagtgatttcctgcgaggaggactggcggctgtgt
ggccccgccgtgtctgcttccctccccgtcgtcacagctgagttcattctcacagggatc
ctgcagcaaaaacttgatttccgcacgtatgtgctctccccccccacagctaccctgcag
cctgcagggggcagaggaagaggcaggaggaggacttag

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