Leuresthes tenuis (California grunion): 140318052
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Entry
140318052 CDS
T11698
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140318052 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltu03019
]
140318052 (clp1)
Enzymes [BR:
ltu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
140318052 (clp1)
Messenger RNA biogenesis [BR:
ltu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
140318052 (clp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
ATP_bind_1
TniB
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
140318052
NCBI-ProteinID:
XP_072251763
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MPLPQFTLSVMATEGVEKASEDAPASGKMCTRFDLEKETELRFEVEAGDTAEQVELELLT
GMAEVFGCELNRNKKYTFGPGSKIAVFTWQGCCVNLFGKPEVAYVSKDTPMLLYLNTHAA
LEQMRKQAERDNERGPRVMVVGPTDVGKSTVCRMLLNYAVRVGRRPTLVELDVGQSGVSV
PGTVSALCIERPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNR
KASVGGCIINTCGWVKGSGYQALVHCASTFQVDVVLVLDHERLYNELKRDLPHFVRVVLL
PKSGGVVERSKECRRDSRDEKIREYFYGFRGVSYYPFSFEVRFSDVRIYKIGAPSIPDSC
LPLGMSQDDTQLKLVPVTPGRDLTYHVLSVSSVDDGDDGARKSIVESPVCGFIVVTFVDT
QTQVLKVLSPAPRPLPRHTLLIMDIRFMDMK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgccacaatttaccttgtcagtcatggcgacggagggtgtggaaaaggcgagt
gaagatgccccagcatccgggaagatgtgcaccaggtttgacctggagaaagagactgag
cttcggtttgaggtggaagcgggagacacagcagagcaagtcgagcttgaactcctcacg
ggaatggccgaagtgtttggctgcgagctgaaccgcaacaagaagtacacatttggacct
gggtccaagatagctgttttcacctggcaaggttgctgtgtgaatctttttggcaaacca
gaggtggcttatgtgtccaaggatactccaatgctgctctacctgaacacacacgctgcc
ctggaacagatgaggaaacaagcagagcgggacaatgagagagggccacgggtgatggtg
gtgggacctacagatgtggggaagtcgacggtgtgtcggatgcttcttaactatgcagtg
agggtcggtaggagaccaacactagtggagctggatgttggacagagtggggtttctgta
ccagggacggtgtcagcactgtgcattgagcgcccggcagacgtggaggagggtttctcg
gtccaggcacctttggtctaccactttggctctactaccccagggacaaacatcaaactg
tacaacaagctgacgtcgtgcctggccgaagtgttttcccagcgctgtgaggtgaacagg
aaagccagcgtgggaggctgtatcatcaacacctgtggctgggtgaagggttctggatac
caggccctggtccactgtgcctctaccttccaggtcgatgtggtgctggtgctggaccac
gagaggctctacaacgagctgaagcgagaccttcctcactttgtgcgagttgttctccta
ccaaagtccgggggagtggtcgagcgctccaaggagtgccggagggattcccgggatgag
aagatccgcgagtatttctatggcttccgtggagtgtcttactacccgttctcttttgaa
gtgcgcttctcagacgtccgcatctacaaaatcggggcaccatctatcccggactcgtgc
ttgcctctgggaatgtctcaggatgatacgcagctaaaattagtgcccgtgacacccggg
agagatctgacatatcacgtgctgagcgtgagcagcgtcgacgatggggatgacggtgcg
agaaagagtattgtagagagcccggtttgtggctttattgtggtaacttttgtagatact
cagacacaggtgctgaaagtgctgtcaccagcacccagaccactgcccagacacactctg
cttatcatggacatccgcttcatggacatgaagtga
DBGET
integrated database retrieval system
