KEGG   Leuresthes tenuis (California grunion): 140318156
Entry
140318156         CDS       T11698                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
ltu  Leuresthes tenuis (California grunion)
Pathway
ltu03010  Ribosome
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    140318156 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ltu03019]
    140318156 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ltu04147]
    140318156 (rack1)
Messenger RNA biogenesis [BR:ltu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     140318156 (rack1)
Exosome [BR:ltu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   140318156 (rack1)
  Exosomal proteins of colorectal cancer cells
   140318156 (rack1)
  Exosomal proteins of bladder cancer cells
   140318156 (rack1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML TRM82_WD WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd DSE1_N Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C ASA1 CFAP251_N Beta-prop_DCAF12 Beta-prop_WDR41 PAC11 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR75_2nd Beta-prop_Vps41 Tricorn_2nd Beta-prop_pof12 Beta-prop_NUP159_NUP214 Cytochrom_D1
Other DBs
NCBI-GeneID: 140318156
NCBI-ProteinID: XP_072251958
LinkDB
Position
Unknown
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLK
GHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRQFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDIINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagttagggggaccctgaaggggcacagtggatgggtcacccag
atcgccactacaccccagtaccccgacatgattctgtcggcgtcccgagataagtccatc
attatgtggaagctgacccgtgatgagaccaactatggcatcccccagcgctccctgaag
ggccactctcactttgtaagtgatgttgtcatctcctcagatggacagtttgccctgtca
ggtgcctgggatgggaccctcaggctgtgggacctcaccactggtctcaccacccgtcaa
tttgttggacacaccaaggatgttttgagcgtggccttctctgccgataaccgccagatt
gtgtctggctcccgggacaagaccatcaagctgtggaacactctcggtgtctgcaaatac
accattcaggatgaaggccacactgagtgggtgtcttgtgttcgcttctccccgaatagc
agcaaccccatcattgtctcctgtggctgggacaagatggtcaaggtgtggaacctggcc
aactgtaagctgaagaccaaccacattggccacaccggctacctgaacacagtgactgtc
tcccctgatggctctctgtgtgcatctggtggaaaggatggccaggctatgctgtgggac
ctgaatgagggcaaacatctctacaccctggacagtggtgacatcatcaatgccctttgc
ttcagccccaaccgctactggctatgtgccgccaccggccccagcattaaaatctgggac
ctggagggcaagatcattgtggatgagctgagacaggaagtgatcagcacaaacagcaag
gctgaaccgccacaatgtacttccctggcttggtctgctgatggacagaccctgtttgct
ggctacactgacaacctgatcagagtgtggcaggtcactattggaactcgataa

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