Leuresthes tenuis (California grunion): 140318231
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Entry
140318231 CDS
T11698
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03273
Virion - Lassa virus and SFTS virus
ltu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140318231 (pcdh20l)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
140318231 (pcdh20l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ltu01009
]
140318231 (pcdh20l)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ltu04515
]
140318231 (pcdh20l)
Protein phosphatases and associated proteins [BR:
ltu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140318231 (pcdh20l)
Cell adhesion molecules [BR:
ltu04515
]
Cadherins
Protocadherins
140318231 (pcdh20l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_2
Cadherin_CELSR2_9th
DUF4193
TMEM100
Motif
Other DBs
NCBI-GeneID:
140318231
NCBI-ProteinID:
XP_072252051
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MGHGTPYNMTLSGLLQSLLLVVHIRQITCDSIQFLVHEELEPGTLVGSLSKHFPPPYQLL
TQEYMWMDTNTGNIYTTEQKMDREYVCPKETKAEECIILHNAVVGPSGDLIQFQVIIEDI
NDNAPHFENSEIHLRVSEDVTVGTSFLLDDQAQDRDMGQNGELRYRLQGSDGAFTVKVDE
DRFSVMLVVQTALDRETQDLYKMQLVATDCGAHPLSASAALIVTVTDVDDNCPSFSSDSP
QSVTIQGDSPKNMVVTQVTATDPDTGPNAAIVYSLSPKVSERAKKFFNLDRRTGYITVAQ
DLYNDNSEELVLKVLATGPHCPPANTNVTISVLPKANQELTIKVRFIVEHQNQTTVLPEN
QPPTVLAVLELEGDSSLKGSSLAIEDDVPFSLNPQNGKYLLSTSKPLDYEIKKEHNIPVV
VHRRSAEGSVIIPSRQVIKVLVTDVNDNAPLFSQSHYQLAVEENNQPEKSLLQVSASDAD
SGYNSRVTYRLEKYTSAIFNVDSVTGQLSVSAPLDREQQDLYKLTVFARDSGSPPLESQA
TVIIRVLDQNDNAPVFLTPHFIFFIPENVPPLAQVGKIEVKDPDEGENGYTELHVVNTSA
PFVVDNARGTLRTTSNLDRETKERHELYVLASDNGHPVALTSTARVTVFVEDINDNQPKV
ILPSSNSSCQTVSPGTLAGTMVTKIYAIDEDSGLNSEITYSVVAPEPAQNSSPFQVDLRS
GNITLSHQLLRKDMGMHHLFIVVRDNGKPTPLYTTVWVNLLVNESMEHCYLDRAPAWTGT
SDLVQSPSKAPTCEVETMKYAQVIFITGLGMLLASTGLLLVSACLCLKNRRSLKKNKMGY
TGENEIPLRLKDKYYSEE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactccttataatatgaccttgtctggactactgcagagtctgctgctt
gtggtccatatcagacagatcacatgtgactctatccagtttttagtccacgaagaactg
gagcctggtactctcgttgggtcactaagtaaacactttccacctccataccagctgctg
acccaggagtatatgtggatggatacaaacactgggaatatctacactactgaacaaaaa
atggatcgcgaatatgtctgccccaaggagacaaaagctgaagaatgcattattctgcac
aatgcggttgtggggccctcaggagaccttatacagtttcaagtgatcatagaggacatc
aatgacaatgcaccacattttgaaaatagtgaaatacacttgagggtgtctgaggacgtg
actgtggggaccagtttcctgctggatgaccaggctcaggacagggatatgggacagaac
ggagagctgcgataccgccttcaaggctctgatggagctttcactgtaaaagtcgacgaa
gacagattttcagttatgctggttgtacaaactgctttggatagggagactcaggacctg
tataaaatgcagctggtggccacagattgtggtgcacatcctttaagtgcctcagcagct
ttaatagtcaccgtgacagatgttgatgacaactgtccaagctttagttctgacagccca
caaagtgtcacaatccaaggtgactcccctaagaacatggtagtcacacaggtcacagcc
acagacccagatacaggcccaaatgctgccatcgtttattccctcagtcccaaggtgtct
gagagggccaagaagttctttaaccttgacagacgcactgggtacatcacagtagcacaa
gacctatacaacgacaactctgaggagctggtgttgaaagtgctagccaccggtcctcac
tgccccccagctaacactaacgtaaccatatccgtgctccccaaggcgaaccaagagctc
acgatcaaggtcaggttcatagttgagcatcaaaaccagactacggtgttaccagagaac
cagccccccacagtcttagctgttttagagcttgagggtgacagcagcttaaaaggctca
tctcttgccatcgaggatgatgtgcctttctctttgaacccacagaatggcaaatatcta
ctttccacatcaaagcctttagactatgagataaaaaaagagcataacattcccgtggta
gtgcataggagatcagcagaaggatctgtgatcattccgtcaaggcaggtgatcaaggtg
ttggtgacagatgtcaatgataatgccccgcttttttcccagtcacactatcagctggct
gtggaggaaaacaaccagccagaaaagtcactgctgcaagtgtcagcatccgatgcagac
agcggatacaacagcagggtgacctacaggctggaaaaatatacatctgccatctttaac
gttgactctgtgacaggacaactgtctgtgtcagctccactggatagggaacaacaggat
ctatacaaactcactgtgtttgctcgagatagtggctctcctccattggagtcccaggcc
actgtaattattcgtgtcctggaccagaatgacaatgcacctgtttttctaacccctcac
tttatctttttcatccctgagaatgtaccaccacttgcccaggtagggaagatagaggtg
aaagacccagacgaaggggagaatggctacacagaattgcatgttgtaaacaccagtgca
ccttttgttgtggataatgcacggggaacactacgcaccaccagcaacttggaccgcgag
acaaaagaacgccatgaactctatgtgttggccagtgataatggccatccggtggctttg
acttccactgccagagtgactgtctttgtggaggacatcaacgacaaccagccaaaagtg
atccttcccagcagtaactcctcatgccagaccgtctctccaggtaccctggcaggtact
atggtaacaaagatctacgccattgatgaggactctggactgaattctgagatcacatac
tctgttgtggcaccagagccagctcaaaacagcagccccttccaggtagacttaaggtca
ggaaacatcaccttaagtcaccagctcctacgtaaagacatgggaatgcatcacctgttc
attgtagtaagagacaatgggaaaccaactcccctttataccactgtctgggttaatctt
ctggtcaatgagagcatggagcactgctacttggacagggctcctgcatggacaggaaca
tctgatttggtgcaaagcccttcaaaagcccctacatgtgaagtggaaactatgaaatat
gcgcaagtgatatttattaccggcttgggcatgttgttggcatccacaggtttgcttttg
gtgtcagcttgtttatgtctgaaaaatagaagaagtctaaaaaagaacaagatgggatac
acgggggagaatgagattccactcaggctcaaagacaaatattattctgaggaataa
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integrated database retrieval system
