Leuresthes tenuis (California grunion): 140319127
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Entry
140319127 CDS
T11698
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ltu Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ltu03000
]
140319127 (sox1a)
Transcription factors [BR:
ltu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
140319127 (sox1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
140319127
NCBI-ProteinID:
XP_072252809
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTTTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLSVGMSSAGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
TYMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSVSPPVSSTHSRGPCPGDLR
EMISMYLPTGEPGDPSMQSRLHALPQHYQSATAGVNGTVPLTHI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgaccttcattcccccggtccccaaacgaatacgacc
acggggcaaacggggccgaatagcgggtccaaagcgaatcaggaacgggtgaagagaccg
atgaacgcgttcatggtgtggtcccgtgggcagcggagaaagatggcacaggagaacccc
aaaatgcacaactcagagatcagcaagcggctgggtgcagagtggaaggtgatgtccgag
gcagaaaagcgtcctttcatcgacgaggcgaagcgcttgcgagccatgcacatgaaggag
catccggattacaagtaccggccaagacggaagaccaagacgctgctgaaaaaggacaaa
tactctcttgccggtggactgctttcagggcccagtggtggcggaggagttggtttaagt
gtcggcatgagttcagccggggtcggacagaggttagaaagcccggggggtcacggaggc
tccgccagctccggctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgcagccgcggcggccgctgcgatgatgcaggaggctcagcttgcctacagccag
caccccgggagcggagcgcaccaccatcaccactcacaccaccaccattcgcacaaccct
cagcccatgcaccgctatgacatgacagccctgcaatacagccccatctcgaactctcag
acctacatgaacgcttctccatccggctacggcgggatcacctacacgcagcaccagggc
tccggcgtctcctcctcagctgccatggggacgttagggtcgctggtgaagtcagagccg
agtgtaagccctcccgtcagcagcacacactcacggggtccttgccccggagacttgaga
gagatgataagcatgtatttaccgaccggagagcccggggacccgtcaatgcagagtaga
ctccatgccttgccgcagcattaccagagcgccacggctggagtgaacgggacggtccct
ctaacacacatttaa
DBGET
integrated database retrieval system
