Leuresthes tenuis (California grunion): 140319492
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Entry
140319492 CDS
T11698
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140319492 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ltu03041
]
140319492 (prpf40a)
Spliceosome [BR:
ltu03041
]
Complex A
U1 snRNP components
U1 related factors
140319492 (prpf40a)
Complex B
140319492 (prpf40a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
CEP164_N
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
140319492
NCBI-ProteinID:
XP_072253248
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSSSEANNGPSQAPPYPGVPPSTIPPPFMGPPGIPPHYPPIGMPPMAQRPPSMTPMPPGI
IPPGIMPPMAAPPMGQMPGMMPPMMPGMMMPPRMPAATVQPTGPPGVDSTAAAPGTSSTT
NGSPQEEQPKKKSLWTEHKSLDGKTYYYNTETKQSTWEKPDDLKSPAEQMLSKCPWKEYK
SDTGKPYYYNSQTKESRWTKPKDLEDLEAMIKAEENGTAETAAPGTTAAPTVQVDNTATM
VTVMEVETAAAVSEEQQSQVTVHQTAEVKTADAPVVSSESSVVTESAPSVEVTKEEPPEI
QKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNA
YKVQTEKEEKEEARIKYKESKETFQRFLENHDKMTSTTRYKKAEQMFSELEVWSCVPERD
RLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPTF
AEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNREAFQKFLDELHD
HGQLHSMSAWMEMYPTLSSDMRFANMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDIL
KDKGFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKM
KRKEAAFKNMLKQATPPLEPETAWEGVRERFLKEPAFEDVTLESERKRIFKDFMHVLEHE
CQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDEEYHKKKKRSQSKSPSERSSSGESERS
YKKSKKHKKKGKKRRHKSASPDSDNEKKGRERDGKREKDVEKDKENDKSRGKSRSESKQK
SPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcggaggctaataatggcccgagccaagcgccaccatatccgggtgtacca
ccatcaacaataccgcccccatttatgggaccaccgggaataccacctcactaccctccc
atcggaatgccccctatggcacagcgaccccccagcatgactccaatgcctcctggtata
attcctcctggcataatgccaccgatggcggcaccaccaatgggacagatgccaggcatg
atgccacccatgatgccagggatgatgatgccccctcgcatgccagctgcgactgtacaa
ccaacgggaccgcctggtgttgactccacagctgcagcacctggaacatctagtactaca
aatggatccccacaagaagagcagccaaagaagaagtccctgtggacagagcataaatca
ctggatgggaagacctattattacaatacagagacgaagcaatccacatgggagaaacca
gatgatcttaaatctcctgcagagcaaatgctgtctaaatgtccctggaaggagtacaag
tcagacacagggaagccttattactacaactctcagacaaaggagtctagatggaccaaa
cccaaagaccttgaggatctggaagctatgatcaaagcagaggaaaatggaacggcagag
acagctgccccaggaaccactgcagctcctaccgtgcaagtagataatacagccactatg
gtgaccgtaatggaggtggaaactgcagcagcagtctctgaggagcaacagtcccaggtg
actgtgcatcaaacagctgaggtcaagacggcagatgcacctgtggtgtcctccgagagc
tcagtcgtcacagagagcgcacccagtgttgaagtcacaaaagaagagccgccggaaatt
cagaagaaaacgtacaaatggaacacaaaagaggaggccaagcaggcgttcaaagagctg
ctgaaggagaagggtgtgtcatcaaactcctcctgggagcaggccatgaagctgattatc
aacgatcctcgctacagcgcgcttcctaaactgagcgaaaagaagcaggcgttcaatgcc
tacaaagtgcaaacggagaaggaggaaaaagaggaggctagaattaaatacaaggagtcc
aaagagacttttcagcgattcttggagaaccatgacaagatgacgtctacaactagatac
aagaaagcagagcagatgttcagtgagctcgaagtgtggagttgtgttcccgagagagat
agactggagatctatgaagatgtgttgttctacctcgctaaaaaagagaaggagcaagcc
aagcagctgagaaagaggaactgggaagctctgaagaacattttggacaacatggccaat
gtcacgtaccgcaccacctggtctgaggcccagcagtacctgctggacaaccctaccttt
gcagaagatgaggagctgcagaatatggacaaagaggatgccctcatttgttttgaggag
cacatccgggctctggagaaggaggaggaagaggagaagcaaaagactctgctcagggag
agaagacgacagcgcaagaacagagaggccttccagaaatttctggacgagctccacgac
cacggccagcttcactccatgtctgcttggatggagatgtacccgaccctcagctcagac
atgcgctttgccaacatgctgggccagcctggttcaactcctttggacctcttcaaattc
tatgtggaagacttgaaagcccgttaccacgatgagaaaagaataattaaagatattctc
aaggacaaaggattcctggttgaagtcaatacgagcttcgatgactttgggtcagtcatc
agctcagacaagagagcgaccacactggatgcaggaaacataaagttggccttcaacagt
ttactggaaaaggctgaggccagagagagggagcgagagaaggaggaggcccgcaagatg
aaaaggaaagaagccgctttcaagaatatgctgaagcaggccacaccgccgctggagcca
gagactgcgtgggagggagtcagagagagattcctgaaagaacccgcctttgaagacgtg
acgctggagtcagagaggaaaagaatattcaaagatttcatgcatgtcttagagcatgag
tgccagcatcaccactcaaagacaaagaagcactcaaagaagtccaagaagcaccacagg
aaacgatcccgctctcgatcaggctcagagtctgaggacgaggagtaccataagaagaag
aagaggtcacagtccaaatctccctccgaacgctcatctagtggagagtctgagagaagc
tataagaagtccaagaagcacaagaagaagggcaagaaacgacgccacaagtctgcttca
ccggattctgacaacgagaagaaaggaagggagcgcgatgggaagcgtgaaaaggacgta
gagaaggataaagagaatgacaaatctcggggcaaatctcgttcagagtccaagcagaaa
tctcctaaaagaaaagcagccaaagaggagggtggctgggatacgtcgggcagtgagctg
agcgaaggagagctggagaaaagaagaagaactttgctggaacagctggatgcaccttga
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