Lachnoanaerobaculum umeaense: D4A81_05480
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Entry
D4A81_05480 CDS
T05639
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lua
Lachnoanaerobaculum umeaense
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lua03032
]
D4A81_05480
03400 DNA repair and recombination proteins [BR:
lua03400
]
D4A81_05480
Enzymes [BR:
lua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D4A81_05480
DNA replication proteins [BR:
lua03032
]
Prokaryotic type
DNA Topoisomerases
D4A81_05480
DNA repair and recombination proteins [BR:
lua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D4A81_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AYA99430
UniProt:
A0A385PZ81
LinkDB
All DBs
Position
1201441..1203678
Genome browser
AA seq
745 aa
AA seq
DB search
MAEKILRTEYSEEMQKSYLDYSMSVITARAIPDARDGLKPVQRRVLYDMSELRIFSDRPH
RKSARIVGDTMGKYHPHGDSSIYETLVVLSQDFKKGMPLIDGHGNFGSIEGDGAAAMRYT
EAKLAKFAEEVYLKDLERTVEFISNYDETEKEPEVLPVRVPNLLINGAEGIAVGMSTSIP
THNLLEVCNTCIAYIKNRNIDTKGLLEVLHGPDFPTGGIIANKRDLLDIYSTGNGKIKLR
GKIEVELGRKKSDKDKLIISEIPYTMVGAGINKFLIDVANLVETKKLSDVVDISNQSDKN
GTRIVLELRKDADIEKIKNILYKKTKLEDTFGVNMLAIVDGRPEILSLKDILKNYIEFQY
EITTKKYNILLNKELEKKEIQEGLIKAVDVIDLIIAILRGSKNLAQAKKCLTSGDTTGIN
FKVKSLEKDAKKLSFTDKQAQAILDMRLYKLIGLEIEALLKDNATTLKNIEEYENILKNH
KNMDKLFIKDLEKIKKDFATPRKTLIEDAKEAVYVEEPIASEEVIFVMDKFGYCRLLDRS
TFDKNAETVESENTYVFPIMNTDRVCIFSNTGVLYKIKVMDLPMSKLRDKGTPIDNLTKF
DSSVEEIMLAVSEDSMRGNFILMITKNGYIKKVSSEEYKTNNKQVASTKLMDEDILIAVK
ILLPRANTDICIVSDAGYILKFNVSEVNEFKKSTRGEKAITLGYNEFVDSLYLTADSRLA
NVNGKEVTLSKVRLSHRGYKGQKMK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaatattgcgaacggaatattcagaggaaatgcaaaaatcctacttggat
tattccatgagtgttataaccgcaagggctatacctgatgcgagagatggcttaaagcct
gtacaaagaagagttttgtatgatatgagtgagctgaggattttcagtgacagacctcat
cgtaaatcagcaagaatagtgggtgatactatgggtaagtatcacccacatggtgacagc
tcaatatatgaaaccttggtagttttgagtcaggactttaaaaagggaatgccactgata
gacggacatggaaatttcggatctatagagggtgacggagctgctgctatgagatataca
gaggcaaagcttgcaaaatttgctgaggaagtatatctgaaggatcttgaaagaactgtt
gaatttatttcaaactatgatgaaactgagaaagaaccggaagtgcttccggtaagagtg
ccaaacctattgataaatggtgctgaaggtattgcagtaggtatgtcaacatcaatacct
actcacaatctactggaggtatgtaatacctgtattgcctatataaagaacagaaatatt
gatacaaaggggcttttggaagtattacatggtccggattttccaaccggtggaataata
gccaataaaagagacttgcttgatatttatagtacaggaaatggtaagataaaacttaga
ggtaagatagaagtagagcttggaagaaaaaaaagtgacaaggataaactgattatttct
gagattccttatactatggttggtgcaggtataaataaatttcttatagatgtagcaaat
cttgttgagactaagaagctttctgatgttgtagatatcagtaatcaatcagataagaat
ggaaccagaatagtgctggagcttaggaaagatgccgatattgaaaaaataaaaaatatt
ctttataaaaagactaaacttgaagatacttttggtgtaaatatgcttgccattgtagat
ggtaggccggagatactctcattaaaggatattttaaagaattatattgagtttcaatat
gagataactacaaaaaagtacaatattcttttaaataaagagcttgagaagaaagaaata
caggaaggtcttataaaggcagtagatgttatagatcttattattgcaatacttcgtggt
tcaaaaaatcttgctcaagctaagaaatgtcttacatcaggtgataccacaggaattaac
tttaaagtgaaatcacttgaaaaggatgcaaaaaaactttcgtttacagataaacaggca
caggcaattttggacatgagactttataagcttataggtcttgagatagaagcactttta
aaggataatgcgacaactctcaaaaatatagaggaatatgaaaacattctaaaaaaccat
aaaaatatggataagctttttataaaggacttggaaaagataaaaaaggattttgcaact
cctagaaaaactttaattgaggatgccaaggaagcggtgtatgtagaggaacctatagcc
agtgaggaagtaatctttgtcatggataagtttggttattgtaggcttctagacagaagc
acctttgataaaaatgcagaaactgtagaaagcgaaaatacctatgtattcccgataatg
aatactgatagagtatgcattttttcaaacaccggtgttttgtataaaattaaggtaatg
gatttgccgatgtcaaaattaagagataaaggaacaccaattgataatctaactaaattt
gatagtagtgtagaagagataatgctggcagtaagtgaagacagtatgcgtggtaacttt
atacttatgattacaaaaaacggatatatcaagaaagtatccagtgaggagtataaaacc
aataataagcaagtagcttctacaaagcttatggacgaagatattctcatagctgtgaag
atactattaccgagagctaatacagatatatgtattgtaagtgatgccggatatattcta
aagttcaatgtttcagaggtgaatgaatttaagaaaagtacaaggggagaaaaggcaata
actttaggatataatgagtttgtagatagcttatatttaacagcagatagccgacttgct
aatgtaaatggaaaagaagttactcttagtaaagtaagattaagccatagaggatacaag
ggccagaagatgaaataa
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