Lachnoanaerobaculum umeaense: D4A81_05640
Help
Entry
D4A81_05640 CDS
T05639
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lua
Lachnoanaerobaculum umeaense
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lua03009
]
D4A81_05640 (rimO)
Enzymes [BR:
lua01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D4A81_05640 (rimO)
Ribosome biogenesis [BR:
lua03009
]
Prokaryotic type
ribosomal protein modification factors
D4A81_05640 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
AYA99459
UniProt:
A0A385Q124
LinkDB
All DBs
Position
1243598..1244920
Genome browser
AA seq
440 aa
AA seq
DB search
MKMSMVSLGCDKNTVDSEMMLGLMNEKGFEYTDVDEEAEVMIINTCGFIQSAKEESINAI
LEAAKLKEEGALKALIVTGCLAQRYKDEIIKEIPEVDALLGTSSFDKIVETVEDVLGGEV
KNEFLDLDRLPSISNKRKNSTGGYYAYLKIAEGCNKNCTYCIIPSLRGNYRSYPLDDLIN
QAKDLTAQGIKELILVAQETTLYGVDLYGEKRLPKLLKELAKIEGIEWIRILYCYPEEIT
DELIEVIANEDKVCKYLDIPIQHASDKILRKMARRTSYNDLVNIIDKLRKNIPGITLRTT
IISGFPGETEEDLETVIDFIKNMKFERLGVFTYSEEEGTVAAGFDNQIEEEEKEARRDRI
MRVQQEISEQNLEKMVGKKFKVLIEGRLPEENVYIGRTYMDVPGVDGYVFVNTNRDFMSG
DFCDVIITGSSEYDLIGDVL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtcaatggtgtcacttggatgtgacaagaatacagtagattcagagatgatg
ctgggtctaatgaatgaaaaaggatttgaatacacagatgtggatgaagaagctgaggta
atgataattaatacctgcggctttatacagtctgcaaaagaagaaagtattaatgccatt
ttggaggcagcaaaactaaaagaagaaggtgctcttaaagcattaatagttacaggttgt
cttgctcaaagatataaagatgaaataataaaggaaataccggaggtagatgctcttctt
ggtacatcaagctttgataaaatagttgaaactgtagaagatgtacttggtggagaagta
aaaaatgaatttcttgatcttgatagattgccatctatttcaaataagagaaagaattca
acaggtggatattatgcgtatctaaagattgcagaaggttgcaataaaaattgtacatac
tgtattattccatcgctacgtggcaattacagaagttacccacttgatgatttaataaat
caggcaaaagatttgacagctcagggaatcaaagaacttattttggtagcccaggagact
actctctatggtgtagacttatatggagagaagagattaccaaagcttttaaaggaactt
gcaaagattgagggcatagagtggatcagaatactttattgctacccggaagaaatcaca
gatgagctcattgaagtgatagccaatgaggataaggtatgtaaatatttggatatacct
atacagcatgcttcagacaaaatacttagaaaaatggcaagaagaacttcatataatgat
ttggtaaatattatagataagcttagaaagaatataccgggtattacacttagaactacc
ataatctcgggattccccggggagacagaagaagatcttgaaacagttattgattttatc
aagaatatgaaatttgagagactgggagttttcacatatagtgaagaagagggtacagtt
gcagcaggctttgataatcaaatcgaagaagaagaaaaagaggctagaagagataggata
atgagagttcagcaggagatatcagaacagaatcttgagaaaatggtaggaaagaaattc
aaggtgcttatagaaggtagacttcctgaggaaaatgtatatattggaagaacctatatg
gatgttcccggtgtggacggatatgtgtttgtaaatactaacagagattttatgtcagga
gatttttgtgatgtcatcataacaggttcgtctgagtatgatttgataggagatgtacta
tga
DBGET
integrated database retrieval system
