Lachnoanaerobaculum umeaense: D4A81_05990
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Entry
D4A81_05990 CDS
T05639
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lua
Lachnoanaerobaculum umeaense
Pathway
lua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D4A81_05990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lua03400
]
D4A81_05990
Enzymes [BR:
lua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D4A81_05990
DNA repair and recombination proteins [BR:
lua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D4A81_05990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
HHH_5
NAT10_TcmA_helicase
AAA_22
HHH_2
NPHP3_N
nSTAND3
SLFN-g3_helicase
T2SSE
UvrD-helicase
AAA
AAA_28
SRP54
MeaB
UvrD_C
KTI12
TrwB_AAD_bind
AAA_16
ABC_tran
RsgA_GTPase
Zeta_toxin
AAA_5
Ribosomal_S13
DEAD
cobW
AAA_24
Thymidylate_kin
AAA_14
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AYA99525
UniProt:
A0A385PZY9
LinkDB
All DBs
Position
1318693..1320927
Genome browser
AA seq
744 aa
AA seq
DB search
MSTVSGYIEKIIYRNESNGYTVLSIEADDDEYVLVGTFNYIAEGEFIKANGNMKLHPTYG
EQLFVDEYEIIEPRELDSIQKYLASSAIKGVGEALAKRIIKKFKMDTLRVMEEEPERLAE
VKGVSAKLAKSISEQIREKKSMRDAMIFLQKFGISMKLSAKIYMEYGSKIYSIIETNPYK
LADDIDGIGFKIADDIAKKVGITADSKFRAIAGVEYILSNAMLSGHLYLPDKVLKSEFLE
LFGENIFDFDSLLSEMQMERRIVVKKSEDMNIYLVQSYYTELAVAKMLIDINIKAKYDIG
KIEEKILKIEEKEGIVLDNLQRQAVIESISSGLIIITGGPGTGKTTTINTIIKYFKSEGE
SIALAAPTGRAAKRMSEATSYEAKTIHRLLEITPNVSENSNNIGNHFERNEDNPIEADVL
IIDEVSMVDIFLMNALLKAVAIGTRLILVGDINQLPSVGPGTVLKDLIESECFNIVRLNK
IYRQSVRSDIVVNAHKIMTDEEIDLSKKSNDFIFIKQNNPDNVMNSIISLIRDKLPTYVN
ATTNELQVMTPMRKGPLGVEALNLFLQNRLNPVSSQKKEKEYDATVFREGDKVMQIKNNY
QKEWFIYNEKHLPVDKGLGVYNGDIGIIKEIDTFSESFTICFDDGRVSNYEFSEFNEIEL
AYAITVHKSQGSEYPAVIIPIYKGPSMLMNRNLIYTAITRAKRCVVLVGIPEVFFNMVQN
TSEMARYTGLKSRILELVMLSKED
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtatcgggctatatagaaaaaatcatttatagaaatgaaagtaatggctat
actgtacttagcatagaggccgatgatgatgaatatgttcttgtcggtaccttcaactat
attgctgaaggcgaatttataaaagcaaatggaaatatgaagctgcatccaacatatgga
gagcagctttttgttgatgaatatgaaattattgaaccaagagaacttgacagtattcaa
aagtatctggcttcttccgcaataaaaggtgtaggcgaagcactggcaaaaagaattata
aaaaaattcaagatggatacacttagagtaatggaagaagagccggaaagacttgctgag
gtcaagggagttagtgcaaaactggctaaatctataagtgaacagattcgagaaaaaaaa
tctatgcgagatgcaatgatttttttacaaaaatttggtattagtatgaaattgtctgca
aagatatatatggagtatggaagtaaaatatatagcattatagagactaatccgtataaa
ttggcagatgatattgacggtataggttttaaaatagcagatgatatcgcaaaaaaagtt
ggaattactgctgattcaaaatttcgtgctattgccggtgtggaatatattctttcaaat
gcaatgttatccggacatctatatttgcctgataaggtactaaaatcagagtttttggaa
ctgtttggagaaaacatatttgactttgattctctattgtctgaaatgcagatggaaaga
agaatagttgtaaagaaaagtgaagatatgaatatatatcttgtacagtcctattataca
gaacttgctgttgcaaagatgcttatagatattaatataaaagctaagtatgatataggc
aaaatagaagaaaaaatactcaaaatagaagaaaaagaaggaatagttcttgacaatctg
caaaggcaggcagttatagaatctattagcagcggtcttataatcattaccggaggtccg
ggaaccggaaagactacaactataaatactattataaaatactttaagagtgaaggtgag
agtattgcactggcagcacctacaggtagagctgcaaagagaatgtcagaagcgacatcc
tatgaggcgaagactattcacagacttttagaaatcactccaaatgtcagtgaaaattca
aataatataggcaatcattttgagagaaatgaagacaaccctatagaagctgatgtactt
attatagatgaggtcagcatggtggatatttttcttatgaatgcacttttaaaagctgta
gccataggaaccagactaattttggtaggagatatcaatcagcttcctagtgtaggtcca
ggtacagtgttaaaggatttaatagaatctgaatgctttaatatagttcgattaaataag
atatatagacagtctgttagaagtgatattgttgtaaatgcacataagataatgactgat
gaagagattgacctttctaaaaaaagtaatgattttatatttattaagcagaataaccct
gataatgttatgaattcaataatttctcttataagggataaattgccgacgtatgtaaat
gctacaaccaatgagttacaggtgatgacacctatgaggaaggggccgcttggagtggaa
gctttaaacttatttttacaaaatcgtctgaatcctgtaagtagtcaaaagaaggaaaaa
gagtatgatgccactgtctttagagaaggtgataaggtaatgcagataaaaaataattat
caaaaggagtggtttatatataatgaaaagcatttaccggtagataaaggacttggagta
tacaatggggatataggtataataaaagaaattgatacattttcagaaagttttacaatt
tgttttgatgatggaagagtatccaactatgaattttcagagttcaatgaaatagaactt
gcatatgctattacagtacataagtcacaaggaagtgagtatccggctgttattatacct
atatataagggaccgtctatgcttatgaatagaaaccttatatatactgctattacaaga
gcaaagagatgcgttgtattagttggcatacctgaggttttctttaatatggtacaaaac
acaagtgaaatggcaaggtatacgggattaaagtcaagaatacttgaactcgtgatgctt
tctaaggaggactaa
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