Lachnoanaerobaculum umeaense: D4A81_06040
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Entry
D4A81_06040 CDS
T05639
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lua
Lachnoanaerobaculum umeaense
Pathway
lua03030
DNA replication
lua03430
Mismatch repair
lua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D4A81_06040
03430 Mismatch repair
D4A81_06040
03440 Homologous recombination
D4A81_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lua03032
]
D4A81_06040
03400 DNA repair and recombination proteins [BR:
lua03400
]
D4A81_06040
Enzymes [BR:
lua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D4A81_06040
DNA replication proteins [BR:
lua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D4A81_06040
DNA repair and recombination proteins [BR:
lua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D4A81_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
DEDDh_C
Rv2179c-like
tRNA_anti-codon
RNase_H_2
HHH_3
Glyco_hydro_114
Motif
Other DBs
NCBI-ProteinID:
AYA99533
UniProt:
A0A385Q439
LinkDB
All DBs
Position
1328495..1332943
Genome browser
AA seq
1482 aa
AA seq
DB search
MLKKFKDVFQSLECSRHIDELLNFVFVEKVSASNDMSLIRINIIAERIIEKKTIFELEAL
IKDKMFPRKNVKIKIFEKFKLSSQYTAKNLFEVYKESIFLEIKNYKIQQYVILNNANISF
DGPYMDMTVEKNILNESIIDDLVRVLEKIFNERCGILCTVRHKFIARKEKVQEIEYAERM
VTKKRDNSDFVMGNSNVAWESGENNEAVKSTEDSTKSDSKKDEEKKKFGNKGYDKKVYTP
KYTKQKPTNPDVFYGRDFDDNFIKLSDLIGEIGEVSVRGKIIEVDSRYLEKSKSTLYIFA
ITDFSDSIYVKMFVRDENLDIIKENIVKGNYVKINGMALIDKFDSELTISSIKGIKKCEK
FEENIRTDNEPVKRVELHCHTKMSDFDGVSSASDIINQAKNWGMDAIAITDHGNIQAFTE
ASHVKNPPKIIYGVEGYLVDDLKELVTNPMDKTLDDGFIVFDIETTGFSAKNDAITEIGA
VKVVKGEIVDRFSTFVNPQRPIPFKIEELTHISDAMVMNAPVIEEILPKFLDFCEDYIIV
AHNAGFDTGFIRENAGRINREYNPSIIDTVAMARLLLPDLNRFKLDTVCKALNISLEGHH
RAVNDAEATAQIWIEFIKRLKDRGLSNLSDVARLGETNADIVKKTKYNHVIILAKNDIGR
INLYKLISLSHIDFFNKRPRIPKSILAKMREGLIIGSACEQGEVYKAILDDATDDEIDRI
VSFYDYLEIQPIGNNMFLLEEEQNDINSIEDLQDINKRIVELGNVYEKPVVATCDVHFLN
PEDEIYRRIIFYGKGYKDADTQPPLYLRTTREMLDEFDYLGSEKAYEVVVTNTRMIADMV
EVISPVRPDKCPPVIENSDEDLTNACYKKAHEQYGEVLPKIVEDRLKKELNSIISNGFAV
MYIIAKKLVEKSNEDGYLVGSRGSVGSSFAAYTSGITEVNPLPAHYYCDCKYVDFDSPEV
KAFAGMAGCDMPDKICPKCGRKLKKDGFDIPFETFLGFKGDKEPDIDLNFSGEYQPNAHE
YTEVIFGKGYTYRAGTVGTLANKTAYGYVKHYFDDKNEDKRKCEINRLAVGCEGVRRTTG
QHPGGIIVLPHGEEIYTFTPVQRPANDMTTKTITTHFDYHAIDHNLLKLDILGHQDPTMI
RMLQDLTGIDPVKDIPLDSKETMSLFQNTSALGVEPKDILDCPLGALGVPEFGTDFAMQM
LIDTKPQGLSDLVRIAGLAHGTDVWLGNAQTLILEGKATIRTAICTRDDIMIYLIEQGLD
EGESFKIMESVRKGKGLTDEWEKHMEENGVPDWYIWSCKKIKYMFPKAHAAAYVMMAWRI
AYCKIFYPLAYYTAYFTIRATGFNYSLMCMGKDKLEFNIAQYKKNPDTTAKYADTLRDMR
IVQEMYARGFEFAKIDLFKVHPTKFQIMDDGKIMPSLSSIEGLGETAATSIVNATKAGPF
ISKDDFMSRAKVGKSTCELLDNLNLLGDLPESNQISFFDLMG
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaaattcaaagatgtttttcaaagtttagaatgttcgcgtcatatagacgaa
cttttaaactttgtttttgtcgaaaaagtaagtgccagcaatgatatgagcttgataaga
ataaatatcattgctgaaaggataatagagaaaaaaacaatatttgaactggaagcactt
ataaaagataagatgtttccaaggaagaatgttaagataaagatttttgaaaaatttaaa
ttatcaagtcagtatactgccaagaatctttttgaagtctataaggagagcatatttctt
gagataaaaaattataagatacaacagtatgtcatattgaataatgcaaatataagtttt
gacggaccatatatggatatgactgtggaaaagaatattttaaatgaaagcattatagat
gatttggtaagagtgcttgaaaaaatctttaatgaaagatgtggaatactttgtacagta
aggcataagtttattgcaagaaaagagaaggtgcaagaaatagaatatgccgaaagaatg
gttacaaagaaaagggataacagtgattttgttatgggaaattctaatgtagcttgggaa
agtggtgaaaataatgaggctgtaaaatcaaccgaggattcaactaagtctgactctaaa
aaagatgaagaaaagaagaaatttggaaataagggctatgataaaaaagtatatactcca
aaatatacaaagcaaaaaccaactaatccggatgttttttatggaagagactttgatgac
aattttataaaactttcagatttaattggagagataggagaggtatctgtaagaggtaag
ataatagaagttgacagcagatatcttgaaaaaagtaaatcaacactttatatttttgca
atcacagactttagcgattctatctatgtaaagatgtttgtgcgtgatgaaaatctggat
ataattaaggaaaatattgtaaaaggcaattatgttaagataaatggtatggcattgatt
gataaatttgatagtgagcttactatatcttcaataaagggtattaaaaaatgtgagaag
tttgaagaaaatatcagaacagacaatgaaccggtaaagagagttgaactgcactgtcat
actaagatgagtgattttgatggagtatcttcagcttcagatataataaatcaagctaaa
aattggggcatggatgcgattgccattacagaccatggaaatatacaggcctttactgaa
gcaagccatgtaaaaaatccaccgaagataatatatggtgttgaaggttacctggtagat
gatttaaaagaacttgtaacaaatcctatggataagactttagatgacggttttatagta
tttgatatagagaccacaggtttctctgcaaaaaatgatgcaattacagaaattggtgct
gtaaaagtggtaaaaggagagattgtagacagattttctacatttgttaatccacagaga
cctatcccttttaagatagaggaacttacacatataagtgatgcaatggtcatgaatgct
cctgttatcgaagagatactgccaaagtttttggatttttgtgaagactatattatagtt
gctcataatgccggatttgatacaggattcattcgagagaatgccggaaggataaataga
gaatataatccgtccataatagacactgtagcaatggctagattacttcttcctgatttg
aataggtttaagcttgacacagtatgcaaggcattgaatatatctctggaaggtcatcat
agagcagtaaatgatgctgaggcgacagcacaaatatggattgaattcataaaaagactt
aaggataggggattaagtaatttatctgatgttgcaagacttggagagacaaatgctgat
attgtgaagaagacaaagtacaaccatgtcattattcttgccaaaaatgatataggcaga
ataaatctgtataagttgatttctctctctcatatagatttctttaataaaagacctaga
atacctaagtctattcttgcaaagatgagagaagggcttattataggaagtgcctgtgaa
cagggagaggtttataaggctattttagatgatgctacagatgatgaaattgatagaatt
gtatcattttatgattatcttgaaattcagcctataggtaacaatatgttccttttagaa
gaagagcaaaacgatattaattcaattgaggaccttcaagacatcaacaaaaggattgta
gagcttggaaatgtctatgagaagccggtggttgctacctgtgatgtgcattttttaaat
cctgaagatgagatatatagaagaattatattttatggaaaaggatataaagatgcagat
acacagccaccactatatcttcgtaccacaagagaaatgcttgatgagtttgattatctt
ggtagtgaaaaagcttatgaagtggttgtgacaaataccagaatgattgcagatatggtg
gaggtaatatcaccggtaagaccggataaatgcccacctgtgatagaaaattcagatgag
gacctcacaaatgcctgctataaaaaagcacatgagcaatatggagaagtgttgccgaaa
atagtcgaagacagattgaaaaaagaacttaactctattatttcaaatggttttgcggtt
atgtatatcatagcgaaaaagctggtggaaaagagcaatgaagatggttaccttgtaggt
tcaagaggttctgtaggttcttcatttgccgcatatacatctggtataacagaggtaaat
ccattacctgcacattattattgtgattgtaaatatgtggactttgattcaccggaggtc
aaagcttttgccggaatggcaggctgcgatatgccggataagatttgtccaaaatgtgga
aggaagttaaaaaaggacggttttgatataccatttgagacattcctcggatttaagggg
gataaagagccggatattgacttgaacttttcgggagaatatcagccaaatgctcatgaa
tataccgaggtgatatttggtaagggatatacttatagagcaggcacagtaggtacttta
gctaataagaccgcctatggttatgtaaagcattattttgatgataaaaatgaggataag
agaaaatgtgagataaacagactggctgtaggttgtgaaggtgtaagaagaaccacagga
caacatcccggaggtatcatagtattaccacatggtgaggagatctatacctttacacct
gtgcaaagaccggcaaatgatatgactacaaagactattacaacacattttgattatcac
gctattgatcataatcttttgaagcttgatattctgggacatcaggatccaactatgatt
agaatgcttcaagatcttacaggcattgacccggtaaaggatatacctttggattctaag
gaaactatgagtttattccaaaatacatctgcacttggtgttgaaccaaaagatatactt
gactgcccattaggtgctttaggtgtaccggagtttggtactgactttgctatgcaaatg
ttaatagatacaaaaccacagggactctcagatttggtgagaatagcaggactggcacat
ggtactgatgtttggcttggaaatgcacagactttgatactggagggcaaggccaccatc
agaactgccatctgtaccagagatgatattatgatttatctgattgagcagggccttgat
gagggtgagtcttttaagataatggagagtgtcagaaagggaaaaggacttactgatgaa
tgggaaaaacatatggaagagaatggtgtgccggattggtatatctggtcttgtaagaag
ataaagtatatgttccccaaagcacatgctgcagcctatgttatgatggcatggagaatt
gcatattgtaagatattttatccactggcatattatacagcgtattttactataagagcg
acaggttttaactattctttgatgtgcatgggtaaggataaacttgagtttaatattgca
cagtacaagaaaaatccagatactacagctaaatatgcggatactttgcgtgatatgaga
atagttcaggagatgtatgccagaggctttgaatttgcaaaaattgatctctttaaagtt
catcccacaaaatttcagataatggatgacggtaagataatgccttcactttcaagcatt
gaaggtctgggagaaacggctgcaacatctatagtcaatgcaaccaaggcaggacctttt
atctcaaaggatgactttatgtccagagctaaggtaggaaagagtacatgtgaattgctt
gataatttgaatctacttggcgatttgcctgagagcaatcagatatcgttttttgatttg
atggggtag
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integrated database retrieval system
