Lachnoanaerobaculum umeaense: D4A81_08425
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Entry
D4A81_08425 CDS
T05639
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lua
Lachnoanaerobaculum umeaense
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lua03016
]
D4A81_08425 (truB)
Enzymes [BR:
lua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D4A81_08425 (truB)
Transfer RNA biogenesis [BR:
lua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D4A81_08425 (truB)
Prokaryotic type
D4A81_08425 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
ArlS_N
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AYA99960
UniProt:
A0A385Q0U0
LinkDB
All DBs
Position
complement(1858274..1859158)
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AA seq
294 aa
AA seq
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MAKNIYNGIINIFKEKGFTSHDVVAKMRGILKQKKIGHSGTLDPDAIGVLPVLLGNATVL
SDMLTDKSKEYEAVLLLGISTDTQDSSGEVLKERDISNLNEDEVKEVINSFLGEYMQLPP
MYSALKVGGKKLVDLAREGKEVKREPRKVNIFDIDIIDIDLPRVRFKAKVSKGTYIRTLC
HDIGEKLSVGGCMESLIRKRVDRFDIDGAISLTQLESERDNIDKRIMSVEEYFSFLPKIN
TSPDFDKYLHNGNKLKFEDKFGNSELYRVYDSGDIFIAIYQKDNKELKPFKMFL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaatatttacaatggaataataaatatcttcaaggaaaaaggatttacttct
catgatgttgtagcaaagatgagagggatattaaaacaaaagaaaataggtcattcaggt
acattggatcccgatgctatcggtgtacttccggtattactgggtaatgcaactgtgcta
tctgatatgcttacagataaatcaaaggaatatgaggctgtactgctacttgggatttct
acagatacacaggattcatcaggagaagttttaaaagaaagagatatttcaaatttgaat
gaagatgaggtcaaagaggtcataaattcttttttaggcgaatatatgcagcttcctcct
atgtattcagcattaaaagtaggtggaaaaaagcttgtagatttagcaagagaaggcaag
gaagtcaaaagagaaccaagaaaagtaaatatttttgatattgatatcattgatattgat
ttgccaagagtaaggtttaaggcaaaggtatcaaagggcacctatatcagaactttatgc
catgatataggggaaaagctttcagtaggaggatgcatggaatcacttattagaaagcga
gtagacagatttgatatagacggggcaataagcctgacacaattggaatcagagagagat
aatatagataaaaggataatgagcgtggaggagtatttttccttcctgccaaagataaat
acctcccctgactttgataaatatctacataatggtaataaattaaaatttgaggataag
ttcggcaatagcgaattatatagggtttatgattctggagatatatttattgcaatatat
caaaaggataataaggaactaaagccatttaagatgtttttatag
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