Lachnoanaerobaculum umeaense: D4A81_10115
Help
Entry
D4A81_10115 CDS
T05639
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lua
Lachnoanaerobaculum umeaense
Pathway
lua03410
Base excision repair
lua03430
Mismatch repair
lua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D4A81_10115 (recJ)
03430 Mismatch repair
D4A81_10115 (recJ)
03440 Homologous recombination
D4A81_10115 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lua03400
]
D4A81_10115 (recJ)
DNA repair and recombination proteins [BR:
lua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D4A81_10115 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D4A81_10115 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D4A81_10115 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYB00262
UniProt:
A0A385Q1H7
LinkDB
All DBs
Position
complement(2158066..2159787)
Genome browser
AA seq
573 aa
AA seq
DB search
MESKWMLYTKRAEFEELSARFNISPVLARIIINRDIKEEDFSIYLKNDLKLMHDVKRLNG
IDEAKDVIMDEINAGRKIRVVGDYDIDGVCSSYILVSALKYFGANVDVKIPDRIKDGYGI
NDNIIKDAAKDGISMIITCDNGIAAHSQMELAKELGIKVVITDHHDVYRKDGKDFLPVAE
VVINPKRSDCDYPFKNICGGLVAYKLMEYIYESLNAGKKLYDDSQLSDLLEVAAIATVGD
VMPLIDENRILVKNGLKSLMHTKNIGLKALIRVTGMEDKRLSAYSIGFVLGPCLNAGGRL
ENALIALNMFMAEDEEDALKYATHLKELNDERKDLTVQNVKKAIENAENEYSEDDILVIY
LENCHESIAGIIAGRVREALGKPTIILTDAFGEENMLKGSGRSIENYNMFEALYEVKDIF
TKFGGHPMAAGMSLEKGRLDEFRKRLNMNSKLCAEDFIQKIWIDIALPFSYLSLDFVREL
DKLEPFGNKNEKPKFARKDIKIISKNILGKNKNVVKMTLEDIDGTRVDGIYFGDGEAFFE
DIGDRKEMDIIYYPDINEYGGRESLQIIISDYR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaaaatggatgctttatacaaagcgggctgagtttgaagaattatcagcccgt
tttaatatttcaccggtattggcaaggattataataaacagagatattaaagaggaagat
ttttctatatatcttaaaaatgatttgaagcttatgcatgatgttaagaggctaaatgga
atagatgaagccaaagatgtcataatggacgagataaatgccgggagaaaaataagagtt
gtaggagactatgatatagacggggtatgttcatcatatatattggtaagtgctttaaaa
tatttcggtgcaaatgtagacgtgaaaataccggataggataaaggatggttatggaatc
aatgataatataatcaaagatgcagctaaagatggcatttctatgattattacatgcgat
aacggtattgcagcacatagtcaaatggagcttgcaaaggaacttggtataaaagtggta
ataacagatcaccatgatgtataccggaaagacggcaaagactttttgcctgttgctgag
gtagtaataaatcccaaaagaagcgattgcgattatccgtttaagaacatttgcggaggt
ttggtagcgtataagttgatggaatatatttatgaaagtctaaatgcaggcaagaaactt
tatgatgattcacagctcagtgatttgctggaagtggctgctatagccactgtaggagat
gtaatgcctctgatagatgaaaatagaatattggtaaaaaacggtctaaagagtcttatg
catacaaaaaatattggacttaaggcacttataagggttaccggtatggaggataaaagg
ttaagtgcatatagtatcgggtttgttcttggcccttgtctaaatgccggaggaagactt
gaaaatgcattgatagctttaaatatgtttatggcagaggatgaggaagatgctttaaaa
tatgctacacatttaaaggaacttaatgatgaaagaaaagatttgactgtacagaatgta
aaaaaagcaatagaaaatgcagaaaatgagtacagtgaagatgatattttggtaatatat
ttggagaattgtcatgagtccattgcaggaataatagcaggtagagttagagaagcactt
ggaaaaccaactattatacttacagatgcatttggtgaggagaatatgcttaaaggttca
ggaaggtccatagaaaactataacatgtttgaagcgttgtatgaggtcaaggacatattt
acaaaatttggaggacatcctatggctgccggaatgagtcttgagaaaggtagattggat
gagtttagaaagaggctaaatatgaactcaaaactttgtgcagaggatttcattcaaaag
atatggatagatattgcattacctttttcatatctaagtcttgattttgtgagagaactg
gacaaacttgagccttttggaaataagaatgagaagcctaagtttgcaagaaaagatata
aagattatttcaaagaatatacttgggaaaaataaaaatgtagttaagatgactttagaa
gatatagacggtaccagagttgacggcatatactttggtgatggtgaagcattttttgag
gatataggggatagaaaagaaatggatataatatattatcctgatatcaatgagtatggt
ggaagagaaagcttacagataattataagtgattataggtaa
DBGET
integrated database retrieval system
