Luteitalea sp. TBR-22: TBR22_A37650
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Entry
TBR22_A37650 CDS
T09892
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lub
Luteitalea sp. TBR-22
Pathway
lub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBR22_A37650 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lub03019
]
TBR22_A37650 (pnp)
03016 Transfer RNA biogenesis [BR:
lub03016
]
TBR22_A37650 (pnp)
Enzymes [BR:
lub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TBR22_A37650 (pnp)
Messenger RNA biogenesis [BR:
lub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TBR22_A37650 (pnp)
Transfer RNA biogenesis [BR:
lub03016
]
Prokaryotic type
tRNA degradation factors
TBR22_A37650 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
DUF5813
Motif
Other DBs
NCBI-ProteinID:
BCS34537
LinkDB
All DBs
Position
4463953..4466136
Genome browser
AA seq
727 aa
AA seq
DB search
MRPHSGAIAVPHTARADRSPGKDMTGNPMHTRSLELGSRALSFETGKLAKQADGSVLVRM
GDTVVLVSACHAASPRQGIDFLPLTVDYREFTYASGRIPGGFFKREGKPTEKEVLTSRLI
DRPIRPLFPAGWAFETQVIAMVISADTDYDSDVLAVTGAGCALALSEMPFLKTIAGVRVG
QVDGQYVINPTFAQRKQSALDLIIAGSADAIMMVEAGAQEVSEETMVGALDAGHAAIKQI
VATIDDLAKAAGKKKIVMPVKEVAHDFYREVEEKVYLPLADAMRIKDKLENYSRVDQVLA
DLVASIPEEEVERRVEAKKIFKGLKEKVMRDEALERGKRLDGRSFEQIRPIWTEVSVLPR
VHGSAVFTRGETQALVTATLGTADDQQKIETMDGETYKRFMLHYNFPPFSVGEVGFMRGP
GRREVGHGALAERALAPVIPAEADFPYTVRVVSDILESNGSSSMASVCGGSMAMMDAGVP
LRAPVAGVAMGLIMDEATGKYAVLTDIAGAEDHYGDMDFKVAGTAQGITALQMDIKVSGI
TMEIMRQALAQALKGRLEILGKMAESIAAPRTQTSQWAPRIVSIRIPVDKIRDVIGPGGK
MIRSIIDRTGVKIDVEDDGRINVASNDEASAARALAIIQELTATPEVGKTYMGKVQRIAD
FGAFVEIMPGVDGLLHVSEIALHRVKDVRDELKEGEQLLVKVLNVDPSGKIRLSRKALLQ
EEQPKAE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgcggccccactcgggcgcgattgccgtaccgcacaccgccagggcagacaggtcccct
ggcaaggacatgacagggaaccccatgcacacacgcagtctcgagctcggatcccgggct
ctctcgttcgaaaccggcaagctcgccaagcaggccgacggctccgtcctcgtccggatg
ggcgacaccgtcgtcctcgtcagcgcctgccacgccgcgtcgccgcgccagggcatcgac
ttcctgccgctgacggtggactaccgcgagttcacctacgcctcgggtcgcatcccgggc
ggcttcttcaagcgcgaaggcaagccgaccgagaaggaagtgctcaccagccgcctgatc
gaccggccgatccgcccgctcttcccggccggctgggcgttcgagacgcaggtcatcgcg
atggtgatctcggccgacaccgactacgactccgacgtcctggcggtgaccggcgcgggc
tgcgcgctggcgctgtcggagatgccgttcctcaagaccatcgccggcgtccgcgtcggc
caggtggacggccagtacgtgatcaacccgaccttcgcgcagcgcaagcagagcgcgctc
gacctgatcatcgccgggagcgccgacgcgatcatgatggtggaggccggggcgcaggag
gtcagcgaggagacgatggtgggcgcgctcgacgcgggccacgccgccatcaagcagatc
gtcgcgacgatcgacgacctcgccaaggccgccggcaagaagaagatcgtgatgcccgtc
aaggaagtcgcccacgacttctaccgcgaggtcgaggagaaggtgtacctgcccctcgcc
gacgcgatgcgcatcaaggacaagctcgagaactacagccgcgtcgaccaggtgctggcc
gacctggtcgcctccatccccgaggaagaggtcgagcgtcgcgtcgaggccaagaagatc
ttcaagggcctgaaggaaaaggtcatgcgcgacgaggccctcgagcgcggcaagcgcctc
gacggccgctcgttcgagcagatccgcccgatctggaccgaggtctcggtgcttccccgc
gtgcacggctcggccgtcttcacgcgtggcgagacgcaggccctcgtcaccgccaccctc
ggcactgcggacgaccagcagaagatcgagacgatggacggcgagacctacaagcgcttc
atgctccactacaacttcccgccgttctcggtgggtgaggtgggcttcatgcgcggcccg
ggccgccgcgaggtgggccacggcgccctcgccgagcgcgccctcgccccggtcatcccg
gccgaggccgacttcccgtacaccgtccgcgtcgtctccgacatcctcgagagcaacggc
tcctcgtcgatggccagcgtctgcggcgggtcgatggcgatgatggacgcgggcgtgccg
ctgcgcgcgccggtggccggcgtcgccatgggcctcatcatggacgaggccaccggcaag
tacgcggtgctgaccgacatcgccggcgccgaggaccactacggcgacatggacttcaag
gtggccggcaccgcgcagggcatcaccgccctgcagatggacatcaaggtctccggcatc
acgatggagatcatgcgccaggcgctcgcccaggcgctgaagggccgcctcgagatcctc
ggcaagatggccgagtcgatcgcggcgccgcgcacccagacctcgcagtgggcgccgcgc
atcgtgtcgatcaggatcccggtcgacaagatccgcgacgtcatcgggcccggcggcaag
atgatccgcagcatcatcgaccgcaccggcgtcaagatcgacgtcgaggacgatggccgc
atcaacgtggcgagcaacgacgaggcctccgcggcccgcgccctggcgatcatccaggaa
ctcaccgcgacgcccgaggtcggcaagacctacatgggcaaggtgcagcgcatcgccgac
ttcggcgcgttcgtcgagatcatgccgggcgtggacggcctcctgcacgtgtcggagatc
gccctgcaccgcgtgaaggacgtgcgcgacgagctgaaggaaggcgagcagctcctcgtg
aaggtgctcaacgtcgacccctcgggcaagattcgcctgagccgcaaggccctcctccag
gaggagcagccgaaggccgaatag
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