Luteitalea sp. TBR-22: TBR22_A40240
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Entry
TBR22_A40240 CDS
T09892
Name
(GenBank) hypothetical protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lub
Luteitalea sp. TBR-22
Pathway
lub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TBR22_A40240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lub03400
]
TBR22_A40240
Enzymes [BR:
lub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TBR22_A40240
DNA repair and recombination proteins [BR:
lub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TBR22_A40240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BCS34798
LinkDB
All DBs
Position
complement(4767958..4768713)
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AA seq
251 aa
AA seq
DB search
MTPFRLVTWNIREGGRGREDAIVATLAALKADVVLLQEATDPVVVEHLAHRTGMVQWGTS
HRQSLGFLARVPVREVAWHRPRVSRHAFLELVPGGGGPHLFGVHLSAVHAAWTERRRVHE
VRALLRTVAARASGFHVLAGDFNTLAPGEWLDVQRLPLRLRPFIWMSGGHIRWRTIQQVL
DAGYADGYRVARPGETGFTFPTWQPHIRLDYVFLPSPGVATLTACEVVSSDTAARGSDHF
PLVAEFAAEAG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccatttcggctggtgacatggaacatccgcgagggtggccgcgggcgcgaggac
gccatcgtcgcgacgctcgcggcgctgaaggccgacgtcgtgctccttcaggaggccacc
gaccctgtcgtcgtcgagcacctcgcgcaccgcaccgggatggtgcagtgggggacgtcg
caccgccagtcgctcggcttcctggcccgcgtgccggtgcgagaagtggcgtggcaccgc
ccacgggtgtcgcgccacgccttcctcgagctggtgcccggcggtgggggcccgcacctc
ttcggcgtgcacctcagtgccgtccacgccgcgtggaccgagcggcgacgcgtgcacgag
gtgcgcgcgctgttgcggacggtggcggcccgcgccagcggtttccacgtcctggctggc
gatttcaacacgctcgccccgggcgagtggctcgacgtgcagcgcctgccgctgcggctg
cggcccttcatctggatgagtggcggccacatccgctggcggaccatccagcaggtgctc
gacgccggctacgccgacgggtaccgtgtggccaggcccggggagaccgggttcaccttc
ccgacctggcagccccacatccgactcgattacgtgttcctgccgtccccgggcgtcgcg
acgctcacggcgtgcgaggtggtgagcagcgacacggctgcccgcggctccgatcatttc
ccgctcgtcgccgagttcgccgccgaggcgggctag
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