Luteitalea sp. TBR-22: TBR22_A44450
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Entry
TBR22_A44450 CDS
T09892
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lub
Luteitalea sp. TBR-22
Brite
KEGG Orthology (KO) [BR:
lub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lub03032
]
TBR22_A44450 (topA)
03400 DNA repair and recombination proteins [BR:
lub03400
]
TBR22_A44450 (topA)
Enzymes [BR:
lub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TBR22_A44450 (topA)
DNA replication proteins [BR:
lub03032
]
Prokaryotic type
DNA Topoisomerases
TBR22_A44450 (topA)
DNA repair and recombination proteins [BR:
lub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TBR22_A44450 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BCS35218
UniProt:
A0A915XQB0
LinkDB
All DBs
Position
complement(5340237..5342897)
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AA seq
886 aa
AA seq
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MSKPLVIVESPAKAKTLARFLGNQFRVEASVGHVRDLPENASEVPESIKKESWGRMGVDV
EHGFKPYYVVSSDRKSRIRELKAAVKDAPEVLLATDPDREGESISWHLREVLKPKGSVKR
IVFHEITEEAVRDAIAHARDIDLKLVDAQESRRILDRLYGYMLSPVLWKKVQTGLSAGRV
QSVAVRLIVEREEERRAFRRSAYWDLDARVRTADTQFTASLVRVGQERVASGKDFDPTTG
ALIGRNVRLLDEAAARGMRESLSQRLPWTVTSVEEKPATQRPSAPFTTSTLQQEANRKLG
FSADRTMSAAQRLFQDGVISYHRTDSTTLSDKALREAARAIKGMYGEPFYGGPRQYQTKV
KNAQEAHEAIRPTDFEQTPQSLSLPPDEARLYDLIWKRTVASQMAEAQLLRTTLEITATG
ADGTPHVFTATGKAIKFAGFLRAYVEGSDDPASELGDQETILPKLAVGDRITAPGLGPVA
LVGLDPKAHETVPPPRYTDASLVKRLEEDGIGRPSTYASIIQTIERRGYVWRQGKALVPS
YTAFAVTRLLKDHFGQLVELGFTGRVEEDLDQVSNGELDRTAFLEQFYNGQDGWPGLRHL
VTNEDRIDYPVIDLGVDPDSGQKIVIRIGRYGAYVQMGEANASIPEDVAPADFTLEQALT
LLREKTQGPQSLGNDPKSGLPVYVLNGRFGPYVQLGEAPEKGSKEKPRRASLTKNDRPDT
MTLARALELLSLPRTVGHDAETGQDIIANFGRFGPYVKRGDEFRSIGADSDVFTITLDQA
IELFKQEKKRGRGRTATRTVLREVGLHPASQAKVEILEGRYGPYVTDGTTNASVPKDVAV
DSLTLDEAVGLLKAREGTSAKKGRGRAPAKRAPAGGARKRAAKRSA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcccctcgtcatcgtcgaaagtcccgccaaggccaagaccctcgcccggttc
ctgggtaaccagttccgcgtcgaggcgagcgtggggcacgtgcgcgacctcccggagaac
gccagcgaggtccccgaatccatcaagaaggagtcgtgggggcggatgggcgtcgacgtg
gagcacggcttcaagccgtactacgtcgtctcgtcggaccggaagtcgcggatccgggag
ctgaaggccgccgtcaaggacgcgccggaagtgttgctggccaccgacccggatcgcgaa
ggcgagtcgatcagctggcacctccgcgaggtgctcaagccgaaggggtccgtcaagcgc
atcgtcttccacgagatcaccgaggaagccgtccgcgacgcgatcgcccatgctcgcgac
atcgacctgaagctggtcgacgcgcaggagagccgccgcatcctcgaccgcctgtacggc
tacatgctgtcgccggtgctgtggaagaaggtgcagacgggcctcagcgccggccgcgtc
cagagcgtggcggtccgcctgatcgtcgagcgcgaggaggagcggcgcgcgttccggcgc
agcgcgtactgggacctcgacgcccgcgtcaggaccgccgacacgcagttcaccgcgagc
ctggtgcgggtcggccaggagcgcgtcgcctccggcaaggacttcgatccgacgaccggc
gcgctcatcgggcgcaacgtgcgcctgctcgacgaggccgcggcccgagggatgcgcgag
tcgctgtcgcagcggctgccgtggacggtcaccagcgtcgaggagaagccggccacgcag
cgcccgtcggcgcccttcacgacgtcgacgctgcagcaggaagccaaccgcaagctcggc
ttctcggccgatcgcacgatgagcgcggcgcagcggctgttccaggacggcgtgatctcg
tatcaccgcaccgactcgacgaccctgagcgacaaggccctccgcgaggcggcgcgggcc
atcaagggcatgtacggggagcccttttacggcggcccgcgccagtatcagaccaaggtc
aagaacgcgcaggaggcccacgaggccatccgcccgaccgacttcgagcagacgccgcag
tcgctgtcgctgccccccgacgaggcgcgcctctacgacctgatctggaagcgcaccgtg
gcgtcgcagatggccgaggcgcagttgttgcgcacgaccctcgagatcaccgccacgggc
gccgacggcacgccgcacgtgttcacggcgaccggcaaggcgatcaagttcgccggcttc
ctgcgggcctacgtggagggcagcgacgatccggcgagcgaactcggcgaccaggagacg
atcctgcccaagcttgcggtgggcgatcgcatcaccgcgcccgggctcggcccggtcgcg
ctcgtcggactcgaccccaaggcgcacgagaccgtgccgccaccccgctacaccgacgcg
tcgctcgtgaagcggctcgaggaggacggcatcggccgcccgtccacctacgcgtcgatc
atccagacgatcgagcgtcgcggctacgtgtggcggcagggcaaggcgctcgtaccgagc
tacaccgcctttgccgtcacccgcctgctcaaggaccacttcggccagttggtggagctc
ggtttcacggggcgcgtcgaggaggatctcgaccaggtctccaacggcgagctcgatcgc
accgctttcctcgagcagttctacaacgggcaggacggctggcccgggttgcgccacctg
gtgaccaacgaggaccgcatcgactacccggtgatcgacctcggcgtcgatccggactcc
gggcagaagatcgtcatccgcatcggccgctacggtgcctacgtgcagatgggcgaggcc
aacgcctcgatccccgaggacgtcgcgccggccgacttcacgttggagcaggcgctcacg
ctgctccgcgagaagacgcaggggccccagagcctcggcaacgacccgaagtccggcctg
ccggtgtacgtgctcaacggccggttcggcccgtacgtgcagttgggggaggcccccgag
aagggcagcaaagagaagccgcgtcgggcctcgctcaccaagaacgaccggcccgacacg
atgacgctcgcgcgggcgctcgagctgttgtcactgccccgcacggtgggccacgatgcc
gagaccgggcaggacatcatcgccaacttcgggcggttcggtccgtacgtgaagcgtggt
gacgagttccggtcgatcggcgccgacagcgacgtgttcacgattaccctcgaccaggcc
atcgagctcttcaagcaggagaagaagcgcggccgcgggcgtaccgcgacgcgcaccgtg
ctgcgcgaggtcggcctgcatcccgcgtcgcaggccaaggtcgagatcctcgaggggcgc
tacgggccctacgtcaccgatggcaccaccaacgcgtcggtgcccaaggacgtcgcggtc
gacagcctcacgctcgacgaggccgtcgggttgctgaaggcgcgtgaagggacgtcggcg
aagaagggccggggccgtgccccggccaagcgagcccctgctggcggcgcccgcaagcgc
gccgcaaagcgatccgcctga
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