Solilutibacter oculi: DCD74_02985
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Entry
DCD74_02985 CDS
T05527
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lue
Solilutibacter oculi
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lue03009
]
DCD74_02985
Enzymes [BR:
lue01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DCD74_02985
Ribosome biogenesis [BR:
lue03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DCD74_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
TRAM
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
UPF0020
Methyltransf_23
Methyltransf_15
PrmA
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AXA83793
UniProt:
A0A344J433
LinkDB
All DBs
Position
617968..619299
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AA seq
443 aa
AA seq
DB search
MARIDQTPFQARILDLSHDGRGVARREGGAHDGKTVFVSGALPGETVMAQQTARSRSFDE
AKTLEVLEASADRVEPRCPHFGTCGGCVLQHLAEDKQIHAKERVLVENLERIGHVSAGAM
LPPLVDAAWGYRRKGRFSVRRVEKKDKTLVGFREQDPRFVADLRECHTVVPEIGFKISAL
SALVDSMDARRVLPQIEFIAGDEARALVFRHLEPLSEGDKDKLRAFGVKHGFAIYLQPKG
LDSVHVLDNAEPPKLSFALKPWQVELLFRPLDFIQVNGGLNEKMITRTLELLDVQPDERV
LDLFCGLGNFTLPLSRVAREVVGVEGDAGLVARARLNAEHNGIGNAKFHMADLATDLRGE
PWMREGFDKLLLDPARAGALEVLKQLPLEGIKRIVYVSCHPGSLARDAGYLVNERGWKLT
QAGVMDMFPHTAHVESIAVFERP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgcatcgaccagacgcctttccaggcccgcatcctcgacctgagccacgacggc
cgcggtgtcgcccgccgcgagggcggtgcccatgacggcaagaccgtattcgtgtccggc
gcgttgccgggcgaaacggtgatggcccagcagaccgcgcgctcgcgcagtttcgacgaa
gccaagaccttggaggtgctggaagcctcggcggatcgcgtcgagccgcgctgcccgcat
ttcggcacctgcggtggctgcgtgttgcagcatctggccgaagacaagcagatccacgcc
aaggaacgcgtgctggtcgagaacctggaacgcatcggccatgtatcggcgggcgcgatg
ctgccgccgctggtggatgcagcctggggctatcgacgcaagggacgtttctcggtgcgt
cgcgtcgagaagaaggacaagacgctggtcggtttccgcgagcaggatccgcgcttcgtc
gccgacctgcgcgaatgccacacggtggtgccggaaatcggcttcaagatttccgcgctc
tccgcgctggtcgattcgatggatgcgcgtcgcgtgctgccgcagatcgaattcatcgcg
ggcgacgaggcgcgtgcgctggtcttccgccaccttgaaccgctgtccgaaggcgacaag
gacaagctgcgtgcgttcggcgtcaaacacggcttcgccatctacctgcagcccaagggc
ctcgactcggtgcatgtgctcgacaacgccgagccgccgaagctctccttcgcgctcaag
ccttggcaggtggaactgctgttccgcccgctggatttcatccaggtcaacggcggcctc
aacgagaagatgatcacgcgcacgctggaactgctcgatgtgcagccggacgaacgcgtg
ctcgacctgttctgcggccttggcaacttcaccctgccgctgtcgcgcgtggcgcgcgaa
gtggtgggcgtggaaggcgatgccggactggtcgcccgtgcgcgcctcaacgccgaacac
aacggcatcggcaacgccaagttccatatggccgatctcgccaccgatctgcgcggtgag
ccatggatgcgcgaaggcttcgacaagctgctgctggacccggcccgcgccggtgcgctg
gaagtgctgaagcaactgccgctggaaggcatcaagcgcatcgtctacgtcagctgccac
cccggctcgctggcgcgcgatgccggctatctggtcaacgagcgcggctggaaactcacg
caggcgggtgtgatggacatgttcccgcataccgcgcacgtcgagtccatcgccgtgttc
gagaggccgtga
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