Solilutibacter oculi: DCD74_05025
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Entry
DCD74_05025 CDS
T05527
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lue
Solilutibacter oculi
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lue03032
]
DCD74_05025
03400 DNA repair and recombination proteins [BR:
lue03400
]
DCD74_05025
Enzymes [BR:
lue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DCD74_05025
DNA replication proteins [BR:
lue03032
]
Prokaryotic type
DNA Topoisomerases
DCD74_05025
DNA repair and recombination proteins [BR:
lue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCD74_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
PB1
Motif
Other DBs
NCBI-ProteinID:
AXA84143
UniProt:
A0A344J533
LinkDB
All DBs
Position
1042400..1043506
Genome browser
AA seq
368 aa
AA seq
DB search
MAAQDTANPKQAAREAGLRYVSERDPGIVRLRRAATFSYRDPDGAAVRDRDTLERIVKLA
IPPAWNEVWICPHPHGHLQATGRDARTRKQYRYHPQWSTVRDGGKFERVIAFGESLPRLR
RALRASLKPAGFGRDKVVAMVVAVMAGTLIRIGNSQYAKQNRSFGLTTLRNRHVAFLKGG
RARFQFTGKSGQVQDVVLDDARLVRLMRRCQQLPGQALFQYLDDDGQRVPVGSDDVNGWL
REAMGEAFTAKDFRTWGGTLEAFRAFTATPPPEGDDATPAPEREWARIEKEVIAGVAQSL
GNTVAVCRKAYIDPAVMQGWRDGTLARYVKGAIGERQWEQAALRFLKSVRRQAARKPARP
KRAAVRAA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggacaccgccaaccccaagcaggccgcgcgcgaagccggcctgcgttat
gtcagtgagcgcgatcccggcatcgtgcggctgcgtcgcgcggcgaccttcagctaccgc
gatcccgatggcgcggcggtgcgtgaccgcgacacgctggaacgcatcgtcaagctcgcc
attccgccggcatggaacgaggtctggatctgcccgcatccgcacggccacctgcaggcc
accggccgcgatgcccgcacccgcaagcagtaccgctaccacccgcaatggagcaccgtg
cgcgatggcggcaagttcgagcgcgtgatcgcgttcggggaatcgctgccgcgcctgcgt
cgcgcgctgcgcgcctcgctgaaacccgccggcttcggccgcgacaaggtggtggcgatg
gtggtcgcggtgatggccggcaccctcatccgcatcggcaacagccagtacgcgaagcag
aaccgctccttcggcctgaccacgctgcgcaaccgccacgtcgccttcctcaagggcggt
cgcgcacgcttccagttcaccggcaagtccggccaggtgcaggacgtggtgctcgatgac
gccaggctggtgcgcctcatgcgccgctgccagcagttgcccgggcaggcgttgttccag
tatctcgatgatgacggccagcgcgtcccggtcgggtccgacgacgttaacggctggttg
cgcgaggcgatgggcgaagccttcaccgccaaggatttccgcacctggggcggcacgctg
gaagccttccgcgccttcactgcgacgccgccgcccgaaggcgacgacgccacgcccgcc
ccggaacgcgaatgggcacgcatcgagaaggaggtcatcgccggcgtggcgcagagcctg
ggcaacacggtcgcggtctgccgcaaggcctacatcgacccggcggtgatgcaggggtgg
cgcgacggcacgctcgcgcgctacgtcaagggcgccatcggcgagcgccagtgggaacag
gccgcgctgcgcttcctcaagtcggtgcgccggcaggccgcacgcaagccggcgcggccc
aagcgcgctgcggtccgcgccgcctga
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