Solilutibacter oculi: DCD74_05940
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Entry
DCD74_05940 CDS
T05527
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lue
Solilutibacter oculi
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lue03016
]
DCD74_05940
Enzymes [BR:
lue01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DCD74_05940
Transfer RNA biogenesis [BR:
lue03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DCD74_05940
Prokaryotic type
DCD74_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXA84294
UniProt:
A0A344J5I4
LinkDB
All DBs
Position
complement(1231787..1232818)
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AA seq
343 aa
AA seq
DB search
MSESIAEQPRAHGAPLIRARARVAPEDFRVDEIDAFDASGAGEHLLLTIEKRGMNTAFAA
RRIAQWAGVAESAIGYAGLKDRHAVTRQRFSVWLPKKIAPDIDTLASDDLKVIASAWHSR
KLPRGALAGNRFVLALREVEGDRDGVDARLQAIAARGVPNYFGEQRFGHGGGNVAQALAM
FAGKRVRREERSLLLSAARSEIFNAALAQRVARGDWDVATEGDVFMLDGSQSVFGPVEID
DAIGARIAGFDIHPTGPMWGRGEPRTAGAIHALETGIAQSHQALCDGLEAAGMKQERRSL
RLPVRGLEWQWLADGALQLSFALPPGAYATVVMRELGEIANAA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcgatcgccgaacagccgcgcgcacatggcgcgccgctgatccgcgcacgc
gcacgggtggcgccggaggatttccgcgttgacgagatcgacgccttcgacgccagcggc
gccggcgaacacctgctgctgaccatcgagaagcgcggcatgaacaccgcgttcgcggcg
cggcgcatcgcgcagtgggcaggcgtggcggaatcggccatcggctacgcggggctgaag
gatcgccatgcggtgacccgccagcgcttctcggtctggttgccgaagaagatcgcgccc
gacatcgacacacttgcctctgacgacctcaaggtcatcgcctcggcttggcacagccgc
aagctgccgcgtggcgcgctggccggcaaccggtttgtgctggcgttgcgcgaggtcgaa
ggcgaccgtgacggtgtggacgcacgcctgcaggccatcgccgcgcgtggcgtgcccaac
tatttcggcgagcagcgtttcggccacggcggcggcaatgtcgctcaggcgctggcgatg
ttcgccggcaagcgcgtgcgccgcgaggagcgctcgctgctgctctccgccgcccgttcg
gaaatcttcaatgcggcgctggcgcaacgcgtggcgcgtggggactgggatgtcgcgacc
gaaggcgacgtcttcatgctcgacggcagccagagcgtattcgggccggtggagatcgat
gacgccatcggcgcgcgcatcgccggcttcgacatccacccgaccgggccgatgtggggg
cgtggagaaccgcgcacggcgggcgcgatccacgcgctggagaccggcatcgcccaatcc
catcaagcgctgtgcgacgggctggaggccgccggcatgaagcaggaacgccgcagcctg
cgcctgccggtgcgcggcctggaatggcagtggctggccgacggcgcgttgcagctgtcg
ttcgcgctgccgcccggtgcctacgccacggtggtgatgcgcgagctgggcgaaatcgcc
aacgcggcctga
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