Solilutibacter oculi: DCD74_06405
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Entry
DCD74_06405 CDS
T05527
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lue
Solilutibacter oculi
Pathway
lue03030
DNA replication
lue03430
Mismatch repair
lue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCD74_06405
03430 Mismatch repair
DCD74_06405
03440 Homologous recombination
DCD74_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lue03032
]
DCD74_06405
03400 DNA repair and recombination proteins [BR:
lue03400
]
DCD74_06405
Enzymes [BR:
lue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCD74_06405
DNA replication proteins [BR:
lue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCD74_06405
DNA repair and recombination proteins [BR:
lue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCD74_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AXA84371
UniProt:
A0A344J5R1
LinkDB
All DBs
Position
1316946..1320467
Genome browser
AA seq
1173 aa
AA seq
DB search
MTARFAHLQLHSEYSLADSTLRIKELVDAAVKRGIPALAITDRNNLFALVKFFKAAEAAG
IKPIAGADLAIALPGEPVSWLTLLCRDNGGYKALSRLISRAWMEGHRNDGVAIAPQWLDE
EDLSGLIAIAGRASQAGALLAQNRHDAAEDALRAMQARFGDRLNLAIARNGREGEEAFNG
FAMAMSSKLGIPLVAGNDVRFLDAEGFDAHEARVCIASGRVLDDPKRPRDYTDQQYLKSA
DEMAALFADAPDALDNTLRLAERCNASLNLGTYYLPDFPVPDEHTLESWIRTQAAEGLAA
RLEKQPLSPGKTRDEYDARLTRELDVIIQMGFPGYFLIVADFINWGKAHGIPVGPGRGSG
AGSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRE
RVSQIITYGTMAAKAVVRDAGRVLGFPYGFVDGIAKLVPMTLGVGLEDALGRTDKSRKDD
AWRSDELIARYRDEDDVRDLLDLALQLEDLTRNAGKHAGGVVIAPEPLAEFCPLFAEHDV
EGLGKNPVTQFDKDDVEAIGLVKFDFLGLRTLTIIDWAVKAINARRERAGEPPLDIAALP
LDDTATYELFARGDTVAVFQFESRGMRELLKRALPDRFEDLIALVSLYRPGPMDLIPDFI
ERKHGRAEVQYPHALLEPVLSPTYGVVVYQEQVMQTAQILAGYSLGGADLLRRAMGKKKV
EEMAKERAKFEAGAQATHDIAPRIAGPIFDLLEKFAGYGFNKSHAAAYALVSYQTAWLKT
HYPAEFMAAVLSSDMDNTDKVVGFLDEARAIELTVLPPDVNASAYMFEAVDPKTLRYGLG
AVKGVGRGACEAIVDAREREGAFTDLLDFCKRVESNKLNRRTLEALIHAGALDALGNNRP
SLLLQLPEALKACEQLAREREAGQVSLFGAVESAAPALHIELPQTHDWPLAEKLRHERET
LGFYLSGHPMDPYRDDLTGVTGFHLGQLEKIWSERAEDEKRGWRPEKTVVLAGQVTGMRR
KGESQAFVQVEDGRGRIECAFFAETFTEYAALLTRDRILIIEGGLREDEFSGGFSLRARR
CWDYSQVCGSHALRLALRLDLRVPGAMEAVDAVLDKHRPGPTPVRFELLREGAAGQLELN
GSHGIRIDQDLAATLRAQPGVRTVKLALGKPWT
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcgcttcgcccacctgcaattgcacagcgagtattcgctggccgattccacc
ctccgcatcaaggagctggtggacgcggcggtgaagcgtggcatcccggcgctggccatc
accgaccgcaacaacctgttcgcgctggtgaagttcttcaaggcggcggaagcggcgggc
atcaagccgatcgccggcgccgacctcgccatcgcgctgccgggcgagccggtcagctgg
ctcaccctgctctgccgcgacaacggcggctacaaggcgctgtcgcgactgatctcgcgg
gcgtggatggaaggccaccgcaacgacggcgtggccatcgcgccgcagtggctggacgag
gaagacctgtccgggctgatcgccatcgccgggcgcgcctcgcaggccggcgcgctgctg
gcgcagaaccgccacgacgccgccgaggacgcgctgcgtgcgatgcaggcgcgtttcggt
gaccggctcaacctcgccatcgcccgcaacgggcgcgagggcgaggaggcgttcaacggc
ttcgccatggcgatgtcgtcgaaactcggcatcccgctggtcgccggcaacgatgtgcgc
ttcctcgatgccgaaggcttcgacgcccatgaggcacgcgtctgcatcgcctccggccgc
gtgctggacgatcccaagcgcccgcgcgactacacagaccagcagtacctgaaatccgcc
gacgagatggccgcgctgttcgccgacgcgcccgacgcgctggacaacacgctgcggctg
gccgagcgctgcaacgccagcctcaacctcggcacctattacctgcccgacttcccggtg
ccggacgagcacacgctggaaagctggatccgcacgcaggccgccgaaggcctcgccgcg
cggctggaaaaacagccgctctcgcccggcaagacccgcgacgaatacgacgcccgcctg
acccgcgagctggacgtgatcatccagatgggcttccccggctacttcctgatcgtggcc
gacttcatcaactggggcaaagcgcacggcatcccggtcgggccggggcgcggttccggc
gccggttcgctggtggcgtgggcgctgggcatcaccgacctcgacccgctgccctacgac
ctgctgttcgagcgcttcctcaaccccgaacgcgtgtcgatgccggacttcgacatcgac
ttctgcatggaccgccgcgacgaggtgatcgactacgtcgcgcgcaaatacggccgcgag
cgcgtcagccagatcatcacctacggtacgatggcggcgaaggccgtggtgcgcgatgcc
ggccgcgtgctcggcttcccctacggcttcgtcgatggcattgcgaagctggtgccgatg
accctcggcgtggggctggaagacgcgctgggccgcaccgacaaatcgcgcaaggacgat
gcctggcgcagcgacgaactgatcgcccgctaccgcgacgaggacgatgtccgcgacctg
ctcgacctcgccctgcagctggaagacctgacccgcaacgccggcaagcacgccggcggc
gtggtgatcgcgccggagccgctggccgagttctgcccgctgttcgccgaacacgatgtc
gaaggcctgggcaagaacccggtgacccagttcgacaaggacgacgtggaagcgatcggc
ctggtcaagttcgacttcctcggcctgcgcacgctgaccatcatcgactgggcggtgaag
gcgatcaacgcgcgccgcgaacgcgcgggcgagccgccgctcgacatcgccgccctgccg
ctggacgacaccgcgacctacgagctgttcgcgcgcggcgacaccgtggcggtgttccag
ttcgaatcgcgcggcatgcgcgagctgctgaaacgcgccctgcccgaccgcttcgaagac
ctgatcgcgctggtgtcgctgtaccgccccggcccgatggacctgatccccgacttcatc
gagcgcaagcatgggcgcgcggaagtccagtacccgcatgccctgctggaaccggtgctg
tcgccgacctacggcgtggtggtgtaccaggaacaggtgatgcagaccgcgcagatcctg
gccggctactcgctcggcggcgccgacctgctgcgccgcgcgatgggcaagaagaaagtc
gaggagatggcgaaggagcgcgccaagttcgaggccggcgcgcaggccacgcacgacatc
gcgcccaggatcgcgggaccgatcttcgacctgctggagaagttcgccggctacggcttc
aacaaatcgcacgccgccgcctacgcgctggtcagctaccagaccgcgtggctgaagacg
cattacccggcggagttcatggcggcggtgctgtcgtcggacatggacaacaccgacaag
gtggtcggcttcttggacgaagcgcgggcgatcgagctcaccgtgctgccgccggacgtc
aacgcatcggcctacatgttcgaggcggtggacccgaagacgctccgctacggcctgggc
gcggtgaagggcgtcggccgcggcgcctgcgaggcgatcgtcgatgcgcgcgagagggaa
ggcgcgttcaccgacctgctcgatttctgcaagcgggtggagtcgaacaagctcaaccgg
cgcacgctggaagcgctgatccacgccggggcgctggatgcgctcggcaacaaccggccc
tccctgctgctgcagctgcccgaggcgctgaaagcctgcgagcaactggcccgcgagcgc
gaggccggccaggtctcgctgttcggcgcggtggaatcggcagcaccggcattgcacatc
gaactgccgcagacccatgactggccgctggcggaaaagctgcggcacgagcgcgagacg
ctgggcttctacctctccggccacccgatggacccgtaccgcgacgacctcaccggcgtc
accggcttccaccttggccagctggagaagatctggagcgagcgcgccgaggacgagaag
cgcggctggcggccggagaaaaccgtggtgctggccggccaggtcaccggcatgcgccgc
aagggcgagtcgcaggccttcgtgcaggtggaagacgggcgcggacgcatcgagtgcgcc
ttcttcgccgagaccttcaccgaatacgccgcgctgctgacccgcgaccgcatcctgatc
atcgaaggcggcctgcgcgaggacgaattctccggcggcttcagcctgcgcgcgcggcgc
tgctgggattacagccaggtctgcggcagccatgcgctgcggctggcgctgcggctggac
ctgcgcgtgcccggcgcgatggaggcggtcgatgccgtcctcgacaagcaccgccccggc
ccgacgccggtccgcttcgaactgctgcgcgaaggcgcggccggccagctggagctcaac
ggcagccacggcatccgcatcgaccaggacctggccgccacgctccgtgcccagcccggc
gtgcgcacggtgaagctggcgctgggcaagccctggacctga
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