Solilutibacter oculi: DCD74_11080
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Entry
DCD74_11080 CDS
T05527
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lue
Solilutibacter oculi
Pathway
lue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCD74_11080 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lue03021
]
DCD74_11080 (rho)
03019 Messenger RNA biogenesis [BR:
lue03019
]
DCD74_11080 (rho)
Transcription machinery [BR:
lue03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DCD74_11080 (rho)
Messenger RNA biogenesis [BR:
lue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DCD74_11080 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA
Fungal_virus_P2_C
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AXA85617
UniProt:
A0A344J9A7
LinkDB
All DBs
Position
complement(2306864..2308537)
Genome browser
AA seq
557 aa
AA seq
DB search
MSRLSDDTQTPEAPAPKRRGRPPKARPEADAAHATPPDSPSPAVPVTDTPPAPPPMESAP
REAGAPEAQGQNDGAQNGNGQPRDDGQRFNNNNRRERFKNRRDRQRDRQRDQGFPDDFGA
QEAFVPRPHPQVPEDFPQYSLSDLKRMPAPKLLDIAEQLQIHEGVARARKQDIIFALLKV
LTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDVYISPSQIRRFNLRTGDHIAGRI
RWPKDGERYFALNVVDTINGEPIEASKNKTLFENLTPLFPRKRFKLERGDGSSEDITGRI
LDLMAPQGKGQRALIVSPPKAGKTMMMQQIASAITYNHPDVHLIVLLIDERPEEVTEMQR
TVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVLPSS
GKVLTGGVDANAMHRPKRFFGAARNVEEGGSLTIIATALVDTGSAMDKVIYEEFKGTGNS
EVHLDRRITEKRVYPAIGVNLSGTRREDLLIEPDLLQKIWILRKLIHPMDEIAAMEFLLD
KMKQTKSNDEFFASMKR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atttcccgcttgtcagacgacacccagacccccgaggctcccgcgcccaagcgtcgcggc
cgcccacccaaggcccgtcccgaggcagatgccgcccacgccaccccgccggattcgcct
tcgccggccgtgccggtgaccgataccccgcccgccccgccgccgatggaatcggccccg
cgcgaggccggtgcccccgaagcccagggccagaacgacggtgcgcagaacggcaacggc
cagccgcgcgacgacggccagcgcttcaacaacaacaatcgccgcgagcgcttcaagaac
cgccgcgaccgccagcgtgaccgccagcgcgaccagggtttcccggacgacttcggcgcg
caggaggccttcgtgccgcgcccgcacccgcaggtgccggaagacttcccgcagtactcg
ctgtccgatctgaagcggatgccggcgcccaagctgctcgacatcgccgaacagctgcag
atccatgaaggcgtggcccgcgcacgcaagcaggacatcatcttcgcgctgctgaaggtg
ctgacccgccacggcgaaggcgtcgccgccgacggcgtgctggagatcctgccggacggc
ttcggcttcctgcgcgcggccgaggccagctacctggccggcccggacgacgtctacatc
agcccgagccagatccgccgcttcaacctgcgcaccggcgaccacatcgccggccgcatc
cgctggccgaaggacggcgagcgctacttcgcgctgaacgtggtcgataccatcaacggc
gagccgatcgaggcgtcgaagaacaagaccctgttcgagaacctgacgccgctgttcccg
cgcaagcgcttcaagctggagcgcggcgatggttccagcgaagacatcaccggccgcatc
ctcgatttgatggccccgcagggcaagggccagcgtgcgctgatcgtcagcccgccgaag
gccggcaagacgatgatgatgcagcagatcgcatcggccattacctacaaccatcccgac
gtgcacctgatcgtgctgctgatcgacgagcgcccggaagaagtgaccgaaatgcagcgc
accgtgcgcggcgaagtcatctcgtccacgttcgatgaaccggccgcgcgccacgtgcag
gtcgcggaaatggtgatcgaacgcgccaagcgtctggtcgagcacaagaaggatgtcgtc
atcctgctcgactcgatcacccgcctcgcccgcgcctacaacaacgtgctgccgtccagc
ggcaaggtgctgaccggcggcgtggacgccaacgcgatgcatcgcccgaagcgcttcttc
ggtgccgcgcgcaatgttgaggaaggcggttcgctgaccatcatcgcgaccgcgctggtc
gataccggcagcgcgatggacaaggtgatctacgaggagttcaagggcaccggcaactcg
gaagtccacctggaccgccgcatcaccgagaagcgcgtgtacccggcgatcggcgtcaac
ctgtccggcacccgccgcgaggacctgctgatcgaaccggacctgctgcagaagatctgg
atcctgcgcaagctcatccacccgatggacgagatcgccgcgatggaattcctgctcgac
aagatgaagcagaccaagtcgaacgacgagttcttcgcctcgatgaagcgctga
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