Solilutibacter oculi: DCD74_11115
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Entry
DCD74_11115 CDS
T05527
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lue
Solilutibacter oculi
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lue03021
]
DCD74_11115 (rpoH)
Transcription machinery [BR:
lue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DCD74_11115 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
IF2_N
HTH_3
HTH_11
SspB
GntR
Phage_terminase
KORA
Motif
Other DBs
NCBI-ProteinID:
AXA85156
UniProt:
A0A344J7Z6
LinkDB
All DBs
Position
2314304..2315182
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AA seq
292 aa
AA seq
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MNATVATYPLIPNNLPVPSAIGSLESYIGAVHQIPVLSVEDEQDLARRLREDNDLGAAQN
LILAHLRFVVHVARGYNGYGLQLGDLIQEGNVGLMKAVKRFDPDMGVRLVSFAVHWIRAE
MHEFIIKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAEEARTIAQDLNVPLAEVMEME
ARLSGRDIGFDAPESDDDDHAPPSPVAYLAANDEDPSEAYERADSEDHQLSMLRESLATL
DARSRDIIKRRWLDADSKVTLQELADEYGVSAERIRQIEANALKKMKALFAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaacggttgccacgtacccgctgattcccaacaacctgccggttccgagcgcc
atcgggtcgctcgagtcctacatcggcgcggtgcaccagattccggtattgagcgtcgag
gacgagcaggacctcgcgcgccgcctgcgcgaggacaacgacctcggcgcggcccaaaac
ctcatcctcgcccacctgcgcttcgtggtgcacgtcgcccggggctacaacggctacggc
ctgcagctgggcgacctcatccaggaaggcaatgtcggcctgatgaaggcggtcaagcgc
ttcgacccggacatgggcgtgcgcctggtgagcttcgcggtgcactggatccgtgccgag
atgcacgagttcatcatcaagaactggcgcatcgtgaaagtcgcgacgaccaaggcgcag
cgcaagctgttcttcaacctgcgcaagtcgaagacgcgcctgggctggatgaacgccgag
gaggcgcggacgatcgcccaggacctcaacgtgccgctggccgaggtgatggagatggaa
gcgcgcctgtcgggccgcgacatcggtttcgatgcgccggagtccgatgacgacgaccac
gcgccgccgtcgccggtcgcctatctcgccgccaacgacgaagatccttccgaagcctac
gagcgtgccgacagcgaggaccaccagctgtcgatgctgcgcgagagcctggccacgctg
gatgcgcgcagccgcgacatcatcaagcgccgctggctggatgccgacagcaaggtgacg
ctgcaggaactggccgacgaatacggcgtcagcgccgagcgcatccgccagatcgaggcc
aacgcgctgaagaagatgaaggcgctgttcgcggcctga
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