Solilutibacter oculi: DCD74_12230
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Entry
DCD74_12230 CDS
T05527
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lue
Solilutibacter oculi
Pathway
lue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCD74_12230 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lue03019
]
DCD74_12230 (recQ)
03400 DNA repair and recombination proteins [BR:
lue03400
]
DCD74_12230 (recQ)
Enzymes [BR:
lue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCD74_12230 (recQ)
Messenger RNA biogenesis [BR:
lue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DCD74_12230 (recQ)
DNA repair and recombination proteins [BR:
lue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DCD74_12230 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
LexA_DNA_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXA85329
UniProt:
A0A344J8G9
LinkDB
All DBs
Position
complement(2548747..2550561)
Genome browser
AA seq
604 aa
AA seq
DB search
MPHSAPDPALDTLQRVFGHPAFRGPQAEIVGHVAGGGDALVLMPTGGGKSLCYQLPALLR
EGCAIVISPLIALMQDQVDALRQLGVAAACLNSALDADTAADVERQLVAGGLDLLYVAPE
RLLAPRFLSLLERSHIALFAIDEAHCVSQWGHDFRPEYRQLTLLHERWPGIPRIALTATA
DPPTRREIAERLQLEDARHFAGSFDRPNIRYTVVQKDNARRQLLDFLRGHADEAGIVYAM
SRRKVEDTAGFLREHGIDALPYHAGMDAETRASNQRRFLREDGVVMVATIAFGMGIDKPD
VRFVAHIDLPKSVEGYTQETGRAGRDGEPAEAWMCYGLGDLVLLRQMIEQGDADDARKRL
EHRKLDALVGYCESMQCRRQVLLASFGETYPQPCGNCDNCLSPPESWDATLAAQKALSCV
YRSGQRFGAGHLIDILRGSDGERIRQFGHDQLSTYGIGTELDARAWRGVFRQLVAGGWLA
VDAEGHGSLRLTGTSAEILKERRPVMLRREAPRKAGRGGRAGSASPHDTLTPQQAPRFDA
LRELRTRLAREQGVPPYVIFHDRTLREIAARNPANHGELAEIGGIGASKLERYGDAVLET
LTAA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgcattccgcccccgaccccgccctcgacaccctgcaacgcgtcttcgggcacccc
gctttccgcggcccgcaggcggagatcgtcgggcacgtcgccggcggcggtgacgccctg
gtgctgatgcccaccggcggcggcaaatcgctctgctaccagctgcccgccctgctgcgc
gaaggctgcgccatcgtcatctcgccgctgatcgcgctgatgcaggaccaggtcgatgcg
ctgcgccagctcggcgtcgccgccgcctgcctcaactccgcgctggatgccgacaccgcc
gccgacgtcgaacgccaactcgtggccggcggactcgaccttctctacgtcgcgcccgaa
cgcctgctcgccccgcgcttcctgtcgctgctggaacgcagccacatcgccctgttcgcc
atcgacgaagcgcactgcgtctcgcaatggggccacgacttccgcccggaataccgccaa
ctcaccctgctccacgaacgctggcccggcatcccgcgcattgcgctgaccgccaccgcc
gatccaccgacccgccgcgagatcgccgaacgcctgcaactggaagacgcccgccacttc
gccggcagcttcgaccgccccaacatccgctacaccgtggtgcagaaggacaacgcgcgc
cggcagctgctcgacttcctgcgcgggcacgcggacgaggccggcatcgtctatgcgatg
tcgcggcgcaaggtggaagacaccgccggcttcctgcgcgaacacggcatcgacgcgctg
ccctaccacgccggcatggacgcggagacacgcgcctccaaccagcgtcgcttcctgcgc
gaggacggcgtggtgatggtggcgacgatcgccttcggcatgggcatcgacaaacccgac
gtgcgcttcgtcgcccacatcgacctgccgaaatcggtcgagggctacacccaggaaacc
ggccgcgccggccgcgacggcgagcccgccgaagcatggatgtgctacggcctgggcgac
ctggtgctgctgcggcagatgatcgaacagggcgatgccgacgacgcccgcaagcggctg
gaacaccgcaagctggacgcgctggtcggctactgcgagtcgatgcaatgccgccgacag
gtgctgctggcgagcttcggcgaaacctatccacagccctgcgggaactgcgacaactgc
ctgtcgccgccggaaagctgggacgccacgctcgccgcgcagaaggcgctgagctgcgtg
taccgcagcggccagcgcttcggcgccgggcatctcatcgacatattgagaggcagcgac
ggcgagcgcatccgccagttcggccacgaccagctcagcacctacggcatcggcaccgaa
ctcgacgcccgtgcctggcgcggcgtgttccggcaactggtcgcgggcggctggctggcg
gtggacgccgaaggccacggcagcctgcgcctgaccggaacgagcgccgaaatcctcaag
gagcgccgcccggtgatgctgcgtcgggaagcgccacgcaaggccggtcgcggcgggcgt
gccggttcggcatcgccccatgacacgctgaccccgcagcaggcgccgcgcttcgatgcc
ctgcgcgaactgcgcacccggctggcgcgcgaacagggcgttccgccctacgtcatcttc
cacgaccgcacattgcgcgaaatcgccgcgcgcaacccggccaaccacggcgaactggcg
gagatcggcggcatcggcgccagcaagctggaacgctatggcgacgccgtgctggaaacg
ctcaccgcggcctga
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