KEGG   Luteimonas granuli: FPZ22_07130
Entry
FPZ22_07130       CDS       T06154                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
lug  Luteimonas granuli
Brite
KEGG Orthology (KO) [BR:lug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lug03016]
    FPZ22_07130
Enzymes [BR:lug01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     FPZ22_07130
Transfer RNA biogenesis [BR:lug03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    FPZ22_07130
 Prokaryotic type
   tRNA splicing ligases
    FPZ22_07130
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QDW66691
UniProt: A0A518N435
LinkDB
Position
complement(1560169..1561395)
AA seq 408 aa
MWPMDTSNYELLHHEGETPIKGWIRGVPLEAQAHAQLRNIASLPFVGPWVAVMPDVHLGI
GATVGSVVPTRGAIIPAAVGVDIGCGMAAVRTTLNARDLPDSLARLRSAIERAIPVGNGP
GGEHRRTPDSVETALAGSGLWQRLERIKAKHPRIRLDKVEKQLGTLGGGNHFIEVCLDES
GAVWVMLHSGSRGTGNLIGTYFIQLARDVLGKRVLGYHVPDRDLAFFMEGEELFDDYVEA
VGWAQDYARANREAMMQRVLHAMRAELPKFRLQAMAVNCHHNYVQKETHAGQEVFVTRKG
AVRAGRDELGIIPGSMGAKSFIVRGLGNAESFESCSHGAGRVMSRTAARSSITLKQHREA
TAHVECRKDPGVIDESPAAYKDIDAVMAAQADLVEVVHTLRQVVCVKG
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgtggcccatggacacctcgaactacgaactcctccaccacgaaggcgaaacccccatc
aagggctggatccgcggcgtgccgctggaagcgcaggcccacgcgcagctgcgcaacatc
gccagcctgcccttcgtcgggccctgggtggcggtgatgccggacgtgcacctgggcatc
ggcgccacggtcggctcggtggtgccgacgcgcggcgcgatcatcccggcggcggtcggc
gtcgacatcggctgcggcatggccgcggtgcgcaccacgctcaatgcgcgcgacctgccg
gactcgctggcgcggctgcgctcggcgatcgagcgcgcgatcccggtcggcaacggtccg
ggcggcgagcaccgcaggacgcccgacagcgtcgagaccgcgctcgccggttccggcctg
tggcagcggctcgagcgcatcaaggcgaagcacccgcgcatccggctggacaaggtggag
aagcagctgggcacgctcggcggcggcaaccacttcatcgaggtctgcctggacgagagc
ggggcggtgtgggtgatgctgcactccggctcgcgcgggaccggcaacctgatcggcacg
tacttcatccagctggcgcgcgatgtgctgggcaagcgcgtgctcggctaccacgtgccc
gacagggacctggccttcttcatggagggcgaggaactcttcgacgactacgtggaggcc
gtgggctgggcccaggactacgcgcgcgccaaccgcgaggcgatgatgcagcgcgtgctg
cacgccatgcgcgcggagctgccgaagttcaggctgcaggcgatggccgtgaactgccac
cacaactacgtgcagaaggagacgcacgcggggcaggaggtgttcgtgacccgcaagggt
gcggtgcgtgccggcagggacgagctcggcatcatccccggcagcatgggcgcgaagagc
ttcatcgtccgcggcctgggcaacgccgagagcttcgagagctgcagccacggcgccggc
cgggtgatgagccgcaccgcggcgcgcagcagcatcacgctgaagcagcaccgcgaggcc
acggcgcacgtcgaatgccgcaaggacccgggcgtgatcgacgagtcgccggccgcgtac
aaggacatcgacgcggtgatggcggcgcaggccgacctggtggaggtggtgcacacgctg
cggcaggtggtgtgcgtgaaggggtga

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