Luteimonas granuli: FPZ22_07525
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Entry
FPZ22_07525 CDS
T06154
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
lug
Luteimonas granuli
Brite
KEGG Orthology (KO) [BR:
lug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lug03019
]
FPZ22_07525 (hrpB)
Enzymes [BR:
lug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPZ22_07525 (hrpB)
Messenger RNA biogenesis [BR:
lug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FPZ22_07525 (hrpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QDW66765
UniProt:
A0A518N4C4
LinkDB
All DBs
Position
1637481..1640024
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AA seq
847 aa
AA seq
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MQEQTFPIDELLPAIRASLSAHPRLVLEAPPGAGKTTRVPLALLDAPWLEGRRIVMLEPR
RVAARAAAGFMAASLGEEVGRTVGYRIRFENRVSAATRVEVVTEGILTRMLQDDPMLEGV
GALLFDEFHERHLAADLGLALALDVQAGLREELRILVMSATLDGERLAKSIDAPRLSSEG
RSHPVEIGHFPARRDEALEHQLRRAVEQALQRHPGDVLAFLPGRREIARASTALAGSDAV
AAAGAGVFELHGDLPVEEQARLLRPAVDGRRRIVLSTNVAESSVTLPGVRVVIDTGLARE
PRYDPNSGFSRLDVVRIAQASADQRAGRAGRVASGWAYRLWPESQRLEPQRRPEIAQVEL
SGLALELAAWGSEALGFVDPPPAGTMAAARDLLHMLGALAPAAGSGEAGTAASTITATGR
RMLALGTHPRLAAMLLAASGPTDRALACDLAALLEARDPLRSRSDALAARWRALAAFRER
RVPADASRSALAAIDAGARQWRRRLRVDAPPPADLPAHALGDLLAHAFPDRIAARHAGDP
HRYQLANGRMARLADDSDLVGEPWLVASELRFDARGDALLLRAAPVDEVVLRRHFGDRFS
ERVETRWDADRRALVAERVRRFAGIVLDSRPAGRPDPAAAAQALVEAVRALGLEVLPWSD
ALRQWRARIGGLRAWMPELGLPDLGDEALMATLDDWLRPAFAGKTRLDALTADELSGALR
ARLDWALQQRVDALAPARITVPSGQSRAIDYAIGDDGRPRPPVLAVKLQELFGLADTPRI
AGGRVPLLLHLLSPAGRPLQVTSDLRSFWDRTWPEVRREMKGRYPKHPWPEDPWNAVPTH
RARPRGA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacagacctttcccatcgacgagctgctgccggcgatccgtgcgtcgctgtcg
gcgcatccgcggctggtgctggaggcaccgccgggggcgggcaagacgacgcgggtgccg
ctggcgctgctggatgcgccctggctggaggggcggcggatcgtgatgctggagccgcga
cgggtcgcggcgcgggcggcggcggggttcatggcggcgtcgctgggcgaggaggtcggc
cggacggtgggctaccggatccgcttcgagaaccgggtgtcggcggcgacgcgggtcgaa
gtggtgaccgagggcatcctgacgcggatgctgcaggacgatccgatgctcgagggcgtc
ggcgccctgctgttcgacgagttccacgaacgccacctggcggcggacctgggcctggcg
cttgcgctggacgtgcaggcggggctgcgcgaggagctgcggatcctcgtgatgtcggcg
acgctcgacggggagcggcttgcgaagtccatcgatgcaccgcggctctcgagcgagggg
cgcagccatccggtggagatcgggcattttccggcgcgccgtgacgaggcgctggagcat
cagctgcggcgggcggtggaacaggcgctgcagcggcatcccggcgatgtgctggcgttc
ctgccggggcggcgcgagatcgcgcgcgcgtcgactgcgctcgccggcagcgatgcggtc
gcggccgccggcgccggggtgttcgaactgcacggcgacctgccggtcgaggaacaggcg
cggctgctgcgtccggccgtggacgggcgccggcgcatcgtgctctccaccaacgtcgcc
gaatccagcgtcaccctgccgggcgtgcgcgtggtgatcgacaccggcctggcgcgtgag
ccgcggtacgacccgaacagcgggttcagccggctcgacgtggtgcgcatcgcccaggcc
tcggccgaccagcgcgcgggtcgggcggggcgcgtggcgtcgggctgggcgtacaggctc
tggccggaatcgcagcggctggagccgcagcggcgaccggagatcgcacaggtcgagctg
tcggggctggcgctggagctggcggcctggggcagcgaggcgctgggcttcgtggatcca
ccgccggcggggaccatggccgccgcgcgcgacctgctgcacatgctcggcgcgcttgcg
ccggcggcgggttccggagaggccggaaccgcggcctcgaccatcacggcgacaggacgc
aggatgctcgcgctcggcacccatccgcgcctggccgcgatgctgctggccgcgtccggt
cccaccgaccgcgcgctcgcctgcgatctggccgcgctgctggaggcgcgcgatccgctg
cgcagccgcagcgatgcgctggctgcgcgctggcgtgcgctcgccgcattccgcgaacgc
cgtgtgcccgccgacgccagccgctccgcactcgccgcgatcgatgccggcgcccgccag
tggcgccgccgcctgcgcgtggacgcaccgccgccggccgacctgcccgcgcacgccctc
ggcgatctgctcgcgcacgccttcccggaccgcatcgccgcccggcatgccggcgatccg
caccgttaccagctcgccaacgggcgcatggcgcgcctggccgacgacagcgacctggtc
ggcgaaccctggctggtcgccagcgagctccgcttcgacgcgcgcggcgatgcgctgctg
ctgcgcgccgcgccagtggacgaggtcgtgctgcgccgccacttcggcgaccgcttcagc
gagcgcgttgaaacccgctgggatgccgatcgccgcgccctggtcgccgagcgcgtgcgc
cgcttcgccggcatcgtgctcgacagccgacccgccggcaggcccgatccggccgccgcc
gcgcaggcgctggtcgaggcggtgcgcgcgctcggcctcgaggtcctgccgtggagcgac
gccctgcggcagtggcgcgcgcgcatcggcgggctgcgcgcatggatgccggagctgggc
ctgccggacctgggcgacgaggcgctgatggcgacgctcgacgactggctgcgtcccgcc
ttcgccggcaagacgcggctcgacgcactcaccgccgacgaactctccggcgcccttcgc
gcgcggctcgactgggcgctgcagcagcgtgtcgatgcgctggcgccggcgcgcatcacc
gtgccttccggccagtcgcgcgccatcgactatgcgatcggcgacgatggccggccgcgg
ccaccggtgctggcggtgaagctgcaggaactgttcgggctcgccgacacgccgcgcatc
gcgggcggccgggtgccgctgctgctgcacctgctgtcgccggcggggcgcccgctgcag
gtcacctccgacctgcgcagcttctgggaccggacctggccggaagtccgccgcgaaatg
aagggccgctacccgaagcatccctggcccgaggatccctggaacgccgttcccacccat
cgggcacgcccccgcggcgcatga
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