Luteimonas granuli: FPZ22_08200
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Entry
FPZ22_08200 CDS
T06154
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lug
Luteimonas granuli
Pathway
lug03420
Nucleotide excision repair
lug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPZ22_08200 (uvrD)
03430 Mismatch repair
FPZ22_08200 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lug03400
]
FPZ22_08200 (uvrD)
Enzymes [BR:
lug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPZ22_08200 (uvrD)
DNA repair and recombination proteins [BR:
lug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ22_08200 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FPZ22_08200 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QDW66872
UniProt:
A0A518N4M3
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All DBs
Position
1783459..1785639
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AA seq
726 aa
AA seq
DB search
MDVSHLLDGLNDAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWLNEVFGVPVHGIFAV
TFTNKAAAEMRHRADALLRHGARGLWIGTFHGLAHRLLRLHWQDAKLPEGFQILDSDDQL
RLVKRVVQQLELDEARFPPRQIAWWINAQKDEGRRPAHIQDGQDEWGSVMLKAYALYQER
CDRAGLVDFAEILLRAHELLRDTPALLAHYRQRFAHLLVDEFQDTNAIQYGFIRLLAGDS
GQVFVVGDDDQAIYGWRGARVENVQRFLKDYPGARTIRLEQNYRSTAAILDAANAVIAHN
PGRLGKKLWTDSGAGDPIDLFAAYNEIDEAEYIVGRIGEWVRDGGSHGDCAVLYRSNAQS
RIIEEKLLQAQVPYRVYGGVRFFERAEVKDTLAYLRLVANRDDDAAFERAVNTPVRGIGG
RTLDEVRMRARADGVSLWEASRRCAAGGGLAARARNALAGFHQLIDTIESELADLPLKDK
IDHVLLRSGLREHYARESTGSLDSRVDNLDELVSVASRFVRGDEDESAALTELVAFLAYA
ALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGMEEGLFPNARSIDESGRLEEERRL
AYVGITRARQKLVLSHAETRRLHGQDMYGMPSRFLREIPPALLNEVRPKVQVSRPRYGQA
PRRDYGHAVVDETPGISVGQGVVHASFGTGVVTDIEGAGAHARVQVNFDGAGSKWLVLAY
AKLQPA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccatctgctcgacgggctcaacgacgcccagcgcgaagccgtgtccgcg
ccgcccggccattacctggtgctggccggcgccggctccggcaagacgcgcgtgctcacc
caccgcatcgcctggctgaacgaggtcttcggggtgccggtgcacggcatcttcgcggtc
accttcaccaacaaggcggccgccgagatgcggcaccgcgccgacgccctcctgcgccat
ggcgcgcgcgggctctggatcggcaccttccacggcctcgcacaccgcctgctgcgcctg
cactggcaggacgcgaagctgccggaaggcttccagatcctcgactcggacgaccagctg
cgcctggtcaagcgcgtcgttcagcagctcgagctcgacgaagcgcgctttcctccgcgt
cagatcgcgtggtggatcaacgcgcagaaggacgagggccggcgcccggcgcacatccag
gacggccaggacgagtggggctcggtgatgctcaaggcgtacgcgctctaccaggagcgc
tgcgaccgcgccggcctggtcgacttcgcggagatcctgctgcgcgcgcacgagctgctg
cgcgacaccccggcgctgctggcgcactaccgccagcgcttcgcgcacctgctggtggac
gaattccaggatacgaacgcgatccagtacggcttcatccgcctgcttgcgggcgactcc
ggccaggtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgccagg
gtcgagaacgtccagcgcttcctgaaggactatcccggcgccaggaccatccggctggag
cagaactaccgctccaccgccgcgatcctcgacgccgccaacgcggtgatcgcccacaac
ccggggcgcctgggcaagaagctgtggaccgacagcggcgctggcgatccgatcgacctg
ttcgccgcctacaacgagatcgacgaggccgagtacatcgtcggccgcatcggcgaatgg
gtgcgcgacggcggcagccacggcgactgcgccgtgttgtaccggagcaacgcccagtcg
cgcatcatcgaggaaaagctgctgcaggcgcaggtgccctaccgggtctacggcggcgtg
cgcttcttcgagcgcgccgaggtcaaggacaccctggcctacctgcgcctggtcgcgaac
cgtgacgatgacgcggccttcgagcgcgcggtcaacacgcccgtgcgcggcatcggcggg
cgcacgttggacgaggtgcggatgcgcgcgcgcgccgacggcgtgtcgctgtgggaagca
tcgcgacgctgcgccgccggcggcggcctggcggcgcgggcgcgcaacgcgctggccggc
ttccaccagctcatcgacacgatcgagtcggagctggccgacctgccgctgaaggacaag
atcgaccacgtgctgctgcgctccggcctgcgcgaacactacgcgcgcgaatcgaccggc
agcctggattcgcgcgtcgacaacctcgacgaactggtctcggtggcctcgcgcttcgtg
cgtggcgacgaggacgaatccgcggcgctgaccgaactggtcgccttcctcgcctacgcc
gcgctcgaggccggcgaaggccaggcccaggccggcgaggacggcgtgcagctgatgacc
ctgcacagcgccaagggcctggagttcccgctggtgttcctggccggcatggaggagggc
ctgttccccaacgcgcgctcgatcgacgagagcgggcgactggaggaggagcggcggctg
gcctatgtcggcatcacccgcgcgcggcagaagctggtgctcagccacgccgaaacccgg
cgcctgcacggccaggacatgtacggcatgccttcgcgcttcctgcgcgagatcccgccg
gcgctgctcaacgaggtgcggccgaaggtccaggtctcgcggccgcgctacggccaggcg
ccgcgccgggactacggccacgcggttgtcgatgagacgccgggcatcagcgtggggcag
ggcgtggtgcatgcgagcttcggcaccggcgtggtcaccgacatcgaaggcgcgggcgca
catgcgcgcgtgcaggtgaacttcgacggcgccggcagcaaatggctggtgctggcctac
gcgaagctgcagccggcctga
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