Luteimonas granuli: FPZ22_10200
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Entry
FPZ22_10200 CDS
T06154
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
lug
Luteimonas granuli
Brite
KEGG Orthology (KO) [BR:
lug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lug03019
]
FPZ22_10200 (hrpA)
Enzymes [BR:
lug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPZ22_10200 (hrpA)
Messenger RNA biogenesis [BR:
lug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FPZ22_10200 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
HA2_N
nSTAND3
SRP54
AAA_30
NACHT
T2SSE
AAA_25
AAA_23
ABC_tran
TsaE
Motif
Other DBs
NCBI-ProteinID:
QDW67212
UniProt:
A0A518N5L0
LinkDB
All DBs
Position
2213280..2217377
Genome browser
AA seq
1365 aa
AA seq
DB search
MNELESRSPDASRASRRAWRAAVDGALSRDRGRLLGLLRRLEQAPADAERRRAFEDAVAR
SVARREARAAALPAAEVDPTLPIAAEAGRIVELLRAHQVVVIAGETGSGKTTQLPKLCLA
AGRGAAGMIGCTQPRRIAARAVARRVAEELQVPLGGAVGYQVRFTENVGEQTAIKFMTDG
ILLAEIQSDRWLSRYDTLIIDEAHERSLNIDFLLGYLKQLLARRPDLKLVVTSATIDTAR
FSAHFDDAPVVSVEGRGHPVELRYRPLEGAATAADGDGGGMSVTEGIVAACDEILRGGGS
GMGGDVLVFLPGEREIRDAHRALEGRTYRHTEVVPLYARLSARDQDRVFNPGAQRRIVLA
TNVAETSLTVPRIHYVVDPGLARVKRYSPRQKLDRLHIEPVSQASANQRAGRCGRVAPGT
CYRLYDEADFAARPEFTDPEIRRAALAGVILRMLSLGLGAIEDFPFLEPPDARAIADGWQ
QLAELGAVDGARRLTATGRLMAKLPVDVKLARMLVAASEQRCLRETLVIAAFLGIQDPRE
RPADQRAAADAAHAAFSDPKSEFVAILRLWEAYRAAHEELTQSQLRKWCDRSFLGFLRMR
EWRELHRQLKLQCAELGWEEEERGGDALFALDAEVVPPEEARVPGPRGRGRGADRQRGVP
DAGNGVASARDLYQRLHGALLVGLPAQVGHALPERDKRRQATYEGPRGRRFQLFPGSTLA
SKPPPWLLSATLLDTEKVWALTNAAIEPEWIEAGLSHLLSRRHFDPRWSRKQGRVIGSEQ
VALFGLVLAAARPFHYGAQYPEESRELFLRDGLVAGEINLRADFVARNRRTLASAEEEEA
KQRRTGLVVDEDWMLRWYRDRIPSEIISAQALDAWFAKLPKEQRRGLQWTRDDLLVADGS
DADRFPAYFPLGDARLAVHYRFEPGAPDDGMTVVVPLHLLNALDAPRLGWLAPGFVEEKA
TALLRGLPKALRRNFVPAPDFARAFAEAHGAADAATDSITGALARFLKRLTGVEVSATGF
DETALEPHLRANLRLLDADGRQVLAESRDLDELRARFGAGAAEAFAAHAAAGLAREALTT
FPDAPIPLSVPGAGGVPAFPALHDEGDSVSLQVHADRAEAERQHPDGVRRLLAIALADRM
RQARKQLPVQPRIALLYAAIESAAPRATAGGRSADVLREDLVDGAFVALTADGPGAIRDP
DAFAAQVDAVGRALFPEAMRRLQQAEKILALVAEVRAALEGRLMGWARGNLDDMQAQLAA
LVPPGFLREVPADALAEYPRYLKALAIRAGRALNDPSRDQQRMLELKPFADALDDARAAG
EAGGAGWQALRWDLEELRVQLFAQELGAKGGVSPKKLAARLAALT
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagctggagtctaggagcccggatgcgagccgggcgtcaaggcgcgcgtggcgc
gcggcggtcgacggcgcgctgagccgggatcgcggccgcctgctcgggctgctgcggcgc
ctggagcaggcgcccgcggacgcggagcggcgccgtgcgttcgaggatgccgtcgcgcgc
tcggtggcccggcgcgaggcgcgggcggcggcgctgcccgcggccgaggtcgacccgacg
ctgccgatcgcggccgaggccggtcgcatcgtcgaactgctgcgcgcccaccaggtggtc
gtgatcgccggcgagaccggttccggcaagaccacccagctgcccaagctctgcctggcc
gccggccgcggcgccgcgggcatgatcggctgcacccagccgcggcgcatcgccgcgcgc
gcggtggcgcggcgcgtggccgaggagctgcaggtgccgctgggcggcgcggtcggctac
caggtgcgcttcaccgagaacgtgggcgagcagaccgccatcaagttcatgaccgacggc
atcctgctggccgagatccagtccgaccgctggctgtcgcgctacgacaccctgatcatc
gacgaggcccacgagcgcagcctcaacatcgacttcctgctcggctacctgaaacagctg
ctggcgcgcaggccggacctgaagctggtggtgacctcggccacgatcgacaccgcgcgc
ttctcggcgcacttcgacgatgcgccggtggtctcggtcgagggtcgcggccatccggtc
gaactccgctaccgtccactggagggggcagccaccgcagcggacggcgacggcggcggg
atgtcggtgaccgaaggcatcgtcgcggcctgcgacgagatcctccgcgggggcggcagc
ggcatggggggtgacgtgctggtcttcctgcccggcgaacgcgagatccgcgatgcccat
cgggcgctggaaggccgcacgtaccgccacaccgaagtggtgccgctgtacgcccggctc
tcggcgcgcgaccaggaccgggtgttcaatccgggggcgcagcgtcgcatcgtgctcgcg
accaacgtcgccgagacctcgctgaccgtcccgcggatccactacgtggtggacccgggc
cttgcgcgcgtgaagcgctacagcccgcggcagaagctggaccgcctgcacatcgaaccg
gtcagccaggccagcgccaaccagcgcgccggccgctgtggccgcgtggcgccgggcacc
tgctatcgcctgtacgacgaagcggacttcgccgcgcgcccggagttcaccgacccggag
atccgccgcgccgcgctcgccggcgtgatcctgcgcatgctgtcgctgggcctgggcgcg
atcgaggatttccccttcctggaaccgcccgatgcgcgcgccatcgccgacggctggcag
cagctggccgagctgggcgcggtggatggcgcgcgcaggctcaccgccaccgggcgcctg
atggcgaagctgcccgtggacgtgaagctggcgcgcatgctggtcgccgcgagcgaacag
cgctgcctgcgggagaccctggtgatcgccgccttcctcggcatccaggatccgcgcgag
cggccggccgaccagcgcgccgccgccgatgcggcgcacgcggccttcagcgatccgaag
tcggagttcgtcgccatcctgcggctgtgggaggcctaccgggctgcgcacgaggagctg
acccagtcgcagctgcgcaagtggtgcgaccgcagcttcctcggcttcctgcgcatgcgc
gaatggcgcgagctgcaccggcagctgaagctgcagtgcgcggaactgggctgggaggag
gaagagcgcggtggtgatgcgctgtttgctctcgatgcggaggtcgtgcccccggaggag
gcgcgggtacccggcccgcgggggcgcggccgtggcgccgacaggcagcgcggcgtgccc
gacgccggcaatggcgtcgcgtccgcgcgcgacctgtaccagcgcctgcacggcgcgctc
ctcgtcggcctgcccgcccaggtcgggcacgcgctgccggagcgcgacaagcgtcgccag
gccacctacgaaggcccgcgcggccgccgtttccagctgttcccgggctcgaccctggct
tcgaagccgccgccgtggctgctttccgccaccctgctcgacaccgagaaggtctgggcg
ctgaccaatgccgcgatcgagcccgagtggatcgaagccggactgtcccacctgctgtcg
cgccgccacttcgacccgcgctggtcgcggaagcagggccgggtgatcggcagcgagcag
gtcgcgctgttcggcctggtcctggccgcggcgcgacctttccactacggcgcgcagtat
ccggaggaatcgcgcgaactgttcctgcgcgacggcctggtcgccggcgagatcaacctg
cgcgccgacttcgtcgcccgcaaccgtcgcaccctggcttccgccgaagaggaagaggcc
aagcagcgccgcaccggcctggtggtcgacgaggactggatgctgcgctggtaccgggac
cggatcccgtcggagatcatcagcgcccaggcgctcgacgcctggttcgcgaagctgccg
aaggagcagcgccgcgggctgcagtggacccgcgacgacctgctggtcgccgacggcagc
gatgccgaccgcttccccgcgtacttcccgctgggcgatgcgcgcctggccgtgcactac
cgcttcgaacccggtgcacccgacgacggcatgaccgtcgtcgtgccgctgcacctgctc
aacgccctggacgcgccgcgcctgggctggctggcgccgggcttcgtggaggagaaggcc
acggcgctgctgcgcggcctgcccaaggcgctgcgccgcaacttcgtgccggcgccggat
ttcgcccgcgccttcgccgaggcccatggcgcggccgacgcggccaccgacagcatcacc
ggcgcgctggcgcgcttcctgaagcgcctgaccggggtcgaggtttccgcgaccgggttc
gacgagacggcgctggagccgcacctgcgcgccaacctgcgattgctcgatgccgacggc
cgccaggtgctggccgaatcccgcgacctcgacgaactgcgggcacgcttcggcgcgggt
gcggccgaggccttcgccgcgcacgccgccgccgggctggcccgcgaggccctgacgacg
ttcccggacgccccgatcccgctctcggtgccgggcgccggcggcgtgccggcctttccc
gcgctccacgacgagggcgacagcgtctcgctgcaggtccacgccgaccgcgcggaggcc
gaacgccagcacccggacggggtgcgccggctgctcgccatcgccctggccgaccgcatg
cgccaggcgcggaaacagctgccggtgcagcccaggatcgcgctgctgtacgcggccatc
gaatccgcggcgccgcgtgcgacggccggcggccggtctgcggatgtcctgcgcgaggac
ctggtggatggcgccttcgtcgcactcaccgccgacggtcccggcgccatccgcgacccg
gacgccttcgccgcgcaggtcgatgcggtcggcagggccctgttccccgaggccatgcgg
cgcctgcagcaggccgagaagatcctggccctggtggccgaggtccgcgctgcgctcgag
ggccggttgatgggttgggcccgcggcaacctcgacgacatgcaggcgcagctcgcggcg
ctggtgccgccgggcttcctgcgcgaggtgccggccgacgccctggccgagtatccgcgc
tatctgaaggcgctcgcgatccgcgcgggccgcgcgctcaacgatccctcgcgcgaccag
cagcgcatgctcgagctcaagcctttcgccgatgcgctggacgacgcgcgcgcggcgggc
gaggccggcggggccggctggcaggccctgcgctgggatctcgaggagctgcgcgtgcag
cttttcgcgcaggaactcggcgcgaagggcggggtgtcgccgaaaaaactggccgcgcgg
ctggcggcgcttacctga
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