Luteimonas granuli: FPZ22_10700
Help
Entry
FPZ22_10700 CDS
T06154
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lug
Luteimonas granuli
Pathway
lug03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPZ22_10700 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lug03021
]
FPZ22_10700 (rpoC)
03400 DNA repair and recombination proteins [BR:
lug03400
]
FPZ22_10700 (rpoC)
Enzymes [BR:
lug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPZ22_10700 (rpoC)
Transcription machinery [BR:
lug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPZ22_10700 (rpoC)
DNA repair and recombination proteins [BR:
lug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPZ22_10700 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
HPS6
Motif
Other DBs
NCBI-ProteinID:
QDW67292
UniProt:
A0A518N5U6
LinkDB
All DBs
Position
2316689..2320933
Genome browser
AA seq
1414 aa
AA seq
DB search
MKDLLNLFNQQRPTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPTAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVTEPGLTPLERGQLLNEEQYMQMRQEHQDDFDAAM
GAEAVFDLLRTIDLQAEMVKLKEEIAATGSETKLKRLTKRIKLVEAFIESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALMDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHECGLPKKMALELFKPFIFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSSNNILSPANGEPIIVPSQDVVLGLYYMTRALENSTGEGMAFANVAEVKRAYDNK
AVGLHAKVKVRISETLIDEAGNRTGKTSIVDTTVGRALLAEILPEGLPFALANTELNKKN
ISRLINSCYRMLGLKDTVVFADKLMYTGFAYATRAGVSIGIDDMIIPEEKKGILAEAETE
VLEIQQQYQSGLVTAGERYNKVVDIWSRTNERVAQAMMKTIGTEVVTNAKGEQVEQKSMN
SVYIMADSGARGSQAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVQQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITETDCGTHDGLTMTPIVEGGDVVEPLKDRVL
GRIVAEDVFLPGDDEEPVVTRNTLLDEAWVQKLEDAGVQAIQVRSTITCESSFGVCAHCY
GRDLGRGHLVNLGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAIDNVTVKTTGSVK
FNNVKSVAHSDGHLVGVSRSGEISVLDQHGRERERYKLPYGATINAKDGMSVKAGQTVAT
WDPHNHPIVSEVKGVVRFVDFVDGITVIEKTDELTGLASREITDPKRRGSQGKDLRPLIR
IVDAKSGEDLNIPGTDLPAQYLLPPRSVVNMQDGDPVGVGDVVAKIPQEASKTRDITGGL
PRVADLFEARKPKDPAILAEKSGVVSFGKDTKGKQRLIIKGVDGDDHEELIPKYRQIIVF
EGEHVEKGETVVDGEPSPQDILRLKGVEELASYLTKEIQDVYRLQGVKINDKHIEVIIRQ
MLRKVEITDAGDSRFLNGEQAERQRVIEENAKLNARSELPVHFNPVLLGITKASLATESF
ISAASFQETTRVLTEAAVRGTRDSLRGLKENVIVGRLIPAGTGLAYHTQRRKNASGLTES
EMETLSAVTAGESRVAEAAPVEGSDASLDGGAEG
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccttctgaacctgttcaaccagcagcgcccgacgctcgacttcgacgcgatc
aagatcgcgctggcctcgcccgacctgatccgttcgtggtcgttcggcgaagtgaagaag
cccgagaccatcaactaccggaccttcaagcccgagcgcgacggcctgttctgcgccgcc
atcttcgggccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtctgcgagaagtgcggcaccgaggtcaccctggccaaggtgcgccgcgag
cgcatgggtcacatcgacctggccagccccaccgcgcacatctggttcctcaagtcgctg
ccctcgcgcatcggcctgatgctcgacatgaccctgcgcgacatcgagcgcatcctgtac
ttcgaggccttcgtggtcaccgagccgggcctgaccccgctggagcgcggccagctgctc
aacgaagagcagtacatgcagatgcgccaggagcaccaggacgacttcgacgccgcgatg
ggcgccgaggccgtgttcgatctgctgcgtacgatcgacctgcaggccgagatggtgaag
ctcaaggaggagatcgccgccaccggctccgagaccaagctcaagcgcctcaccaagcgc
atcaagctcgtggaagcgttcatcgagtcgggcaaccgtcccgagtggatggtcatgacc
gtgctgccggtgctgccgccggacctgcgcccgctggtgccgctggacggcggccgcttc
gcgacttcggacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgc
cgcctgctcgaactcaacgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gagtcggtggatgcgctgatggacaacggccgtcgcggccgcgccatcaccggcaccaac
aagcgcccgctcaagtcgctggccgacatgatcaagggcaagcagggccggttccgccag
aacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtggtcggcccgacc
ctgcgcctgcacgagtgcggcctgccgaagaagatggccctggagctgttcaagcccttc
atcttcgccaagctgcagcgccgcggcctggccaccaccatcaaggcggccaagaagctc
gtcgagcgcgaagaggcggaggtctgggacatcctcgaagaggtgatccgcgagcatccg
gtgctgctcaaccgcgcaccgaccctgcaccgcctgggcatccaggcgttcgagccggtg
ctgatcgagggcaaggcgatccagctgcacccgctggtctgcaccgcgttcaacgccgac
ttcgacggcgaccagatggccgtgcacgtcccgctgagcctcgaggcccagctggaggcg
cgcgcgctgatgatgtcgtcgaacaacatcctttcgcccgccaacggcgagccgatcatc
gtgccctcgcaggacgtggtgctgggcctgtactacatgacccgcgcgctggagaacagc
acgggcgaaggcatggccttcgccaacgtggccgaggtcaagcgcgcctatgacaacaag
gccgtgggcctgcacgccaaggtcaaggtgcgcatcagcgagacgctgatcgacgaggcc
gggaaccgcacggggaagacctcgatcgtggacaccacggtcgggcgcgcgctgctggcc
gagatcctgccggagggcctgcccttcgcgctggccaacaccgaactcaacaagaagaac
atcagccgcctgatcaactcctgctaccgcatgctggggctgaaggacacggtcgtgttc
gccgacaagctgatgtacaccggtttcgcgtacgccacgcgcgccggcgtgtcgatcggc
atcgacgacatgatcatccccgaggagaagaagggcatcctcgccgaggccgagaccgag
gtgctggagatccagcagcagtaccagtcgggtctggtgaccgcgggcgagcgctacaac
aaggtggtcgacatctggtcgcgcaccaacgagcgcgtcgcgcaggcgatgatgaagacc
atcggcacagaggtggtcaccaacgccaagggcgagcaggtcgagcagaagtcgatgaac
tcggtctacatcatggccgactcgggcgcccgtggttcgcaggcgcagatccgccagctg
gccggcatgcgcggcctgatggccaagcccgacggctcgatcatcgagaccccgatcacc
tcgaacttccgcgagggcctgaacgtccagcaatacttcatctcgacccacggcgcccga
aagggcctcgcggacaccgcgctgaagaccgcgaactccggctacctgacccgccgcctg
gtcgacgtcgcccaggacgtggtgatcaccgagaccgactgcggcacccacgacggtctg
accatgaccccgatcgtggaaggcggtgacgtggtcgagccgctgaaggatcgcgtgctg
ggccgcatcgtggccgaggacgtgttcctgcccggcgacgacgaggagccggtggtgacc
cgcaacacactgctcgacgaagcctgggtgcagaagctcgaggatgccggcgtgcaggcc
atccaggtccgctcgaccatcacctgcgagtcgtccttcggcgtctgcgcgcactgctac
ggtcgcgaccttggccgcggccacctggtcaacctcggcgaagccgtgggcgtggttgcc
gcgcagtcgatcggcgagcccggcacccagctgaccatgcgtacgttccacatcggtggc
gcggcttcgcgagcggctgcgatcgacaacgtgacggtgaagaccaccggttcggtcaag
ttcaacaacgtcaagtcggtcgcgcactccgacggtcatctggtgggcgtgtcgcgttcc
ggcgagatctcggtgctcgaccagcacggccgcgagcgcgagcgctacaagctgccctac
ggtgcgacgatcaacgccaaggacggaatgtcggtcaaggccggccagacggtcgccacc
tgggatccgcacaaccacccgatcgtgtcggaagtgaagggcgtggtgcgcttcgtcgac
ttcgtcgacggcatcaccgtgatcgagaagaccgacgagctgaccggcctggcctcgcgc
gagatcaccgatcccaagcgtcgcggctcgcagggcaaggacctgcgcccgctgatccgc
atcgtcgacgccaagtccggcgaggacctcaacatccccggcaccgaccttcccgcgcag
tacctgctgccgccgcgctcggtggtgaacatgcaggacggcgatccggttggcgtgggc
gacgtggtcgccaagatcccgcaggaagcctccaagacccgcgacatcaccggcggcctg
ccgcgcgtggccgacctgttcgaggcccgcaagcccaaggacccggcgatcctggccgag
aagtcgggcgtcgtcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaag
ggcgtggatggcgacgaccacgaggagctgatcccgaagtaccgccagatcatcgtgttc
gagggcgagcacgtggagaagggcgagaccgtggtggacggcgagccgagcccgcaggac
atcctgcgcctgaagggtgtcgaggagctggcgtcgtacctgaccaaggaaatccaggac
gtctatcgcctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcattcgccag
atgctgcgcaaggtggagatcaccgacgccggcgacagcaggttcctcaacggcgaacag
gccgagcgccagcgcgtgatcgaggagaatgcgaagctcaacgccaggagcgagctgccg
gtgcacttcaatccggtgttgctgggcatcaccaaggcgtcgctggcgaccgagtcgttc
atctccgctgcctccttccaggagaccacccgcgtgctgaccgaggccgccgttcgcggc
acccgcgacagcctgcgcggcctcaaggagaacgtcatcgtcggccgcctgatcccggca
ggcaccggcctggcgtaccatacgcagcgccgcaagaacgcctcggggctgacagagtcc
gagatggagaccctgtccgcggtgaccgcgggcgagtcccgggtcgcggaagccgcgccg
gtcgaggggagcgatgcttccctggacgggggcgcggaaggctga
DBGET
integrated database retrieval system
