Luteimonas granuli: FPZ22_11580
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Entry
FPZ22_11580 CDS
T06154
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lug
Luteimonas granuli
Brite
KEGG Orthology (KO) [BR:
lug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lug03009
]
FPZ22_11580 (rlmD)
Enzymes [BR:
lug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FPZ22_11580 (rlmD)
Ribosome biogenesis [BR:
lug03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FPZ22_11580 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
MTS
Methyltransf_11
RrnaAD
Cons_hypoth95
Methyltransf_23
PrmA
Methyltr_RsmB-F
CMAS
MetW
Motif
Other DBs
NCBI-ProteinID:
QDW67443
UniProt:
A0A518N6B6
LinkDB
All DBs
Position
2485537..2486865
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AA seq
442 aa
AA seq
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MARIDQTPFEAVILGAAHDGRGITRRPEEHPHAGKAVFIAGALPGERVLARQTRRCRRFD
EAEVVAVLDPSPDRVEPRCPHFGTCGACSLQHLAPERQVEGKARMLADCFGHAGVAAEAA
LPPLTGASWGYRRKGRLSVRRVEKKDRTLVGFRERDARFVAELRECHSIVPGVGMRLEAL
SKLVDGLDARSAIPQIEFSAGDEVTALVVRHLEPLGEGDRAALVEFAQEHGFAIHLQPGG
LDTVAPLWPTEPRLSFRFAPWDVELVFEPLDFIQVNGDLNEKMIAHALALLDVQPGERVL
DLFCGLGNFSLPLGRHAAEVVGVEGDAGLVARARANAARNGMENVHFHVADLATDLSAEP
WMGAGFDRLLLDPARAGALELLQQLPLDGLKRIVYVSCNPETLARDAAYLVNERGWRMRA
AGVMDMFPHTTHVESIAVFEPA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttggctcgcatcgaccagacacccttcgaggccgtgatcctcggggcggcccatgacggc
cggggcatcacacgacggcccgaggagcacccgcacgccggcaaggccgtgttcatcgca
ggcgccttgcccggcgagcgcgtgctcgcgcgccagacccggcgctgccgccgtttcgac
gaggccgaggtggtcgcggtgctggatccttcgccggaccgcgtcgaaccgcgctgcccg
cacttcggcacctgcggtgcatgcagcctgcagcacctggcgccggagcggcaggtggaa
ggcaaggcgcggatgctggccgactgcttcggtcacgcaggggtggcggcggaggccgcg
ctgccgcccctgaccggcgcctcctggggctatcgacgcaagggccggctgtcggttcgg
cgggtggagaagaaggacaggacgctggtggggttccgcgagcgcgatgcgcgcttcgtc
gccgaactccgcgagtgccattcgatcgtgcccggggtcggcatgcgcctggaagcgctt
tcgaagctggtcgatggcctggacgcgcgcagcgccattccgcagatcgagttcagcgcc
ggcgatgaggtcacggcgctggtggtccgccacctggaaccgctgggggagggcgaccgt
gcggcgctggtggaattcgcgcaggaacacggcttcgccatccatctgcagccgggaggc
ctcgataccgtcgcgcccctgtggccgacggagccccggctgtcgttccgcttcgcgccc
tgggacgtcgagctggtcttcgagccgctggacttcatccaggtcaacggcgacctcaat
gaaaagatgatcgcgcacgcgctggctctgctcgacgtgcagccgggcgagcgggtgctc
gacctgttctgcggactgggcaacttcagcctgccgctgggccggcacgcggcggaagtc
gtgggcgtggagggcgacgccgggctggtggcgcgcgcgcgcgcgaacgcggcccgcaat
ggcatggagaacgtccacttccacgtcgccgacctcgccaccgatctctcggcggagccg
tggatgggcgcaggcttcgaccggctgctgctcgatccggcgcgcgcgggcgcgctggaa
ctgctccagcagctgccgctggacggcctgaagcgcatcgtctacgtgagctgcaatccc
gaaacgctggcgcgcgatgccgcgtacctggtcaacgaacggggctggcgcatgcgcgcg
gccggcgtcatggacatgttcccgcataccacgcacgtggagtcgatcgcggtcttcgag
ccggcctga
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