Luteimonas granuli: FPZ22_13360
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Entry
FPZ22_13360 CDS
T06154
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
lug
Luteimonas granuli
Pathway
lug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FPZ22_13360 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lug03400
]
FPZ22_13360 (sbcB)
Enzymes [BR:
lug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FPZ22_13360 (sbcB)
DNA repair and recombination proteins [BR:
lug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FPZ22_13360 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPZ22_13360 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPZ22_13360 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QDW67740
UniProt:
A0A518N747
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All DBs
Position
complement(2890763..2892265)
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AA seq
500 aa
AA seq
DB search
MSGSFLFYDLETWGTDPRRTRIAQFAAIRTDAELNGLGDPIEFLVRPADDLLPSPGASMV
TGLAPQDALHTGLSEAEAFARMVEEMGQPGTCTLGYNSLRFDDEFVRHGLFRNFHDPYER
EWRNGNSRWDLLDVMRLAHALRPEGIIWPVREDGATSFRLEHLAEANGVRMGDAHEALSD
VRALIGLARLFRSSQPRLWDYALALRDKRHVAGLLDPFAMRPVLHVSQRYPAARMCAAAV
LPLAQHPQIGNRVIVYDLDAEPDDLLALSPDEIADRLYVRAADLPEGVARVPLKEVHTNR
SPALVRWDHLRPADFERLGLDPAIAESRAARIREQAPLIAEKVRQVFARERDERAPPDVD
AALYGGFLGDGDRARLAMVRATPPGQLGIRDFGFQDPRLPELLFRYRARNWPDTLDAAER
ARWDDYRRRRLCDDSGLSECSFDAYFNDIAQLRGEHAGRLALLDRLEAWGRELAADLAPA
DATAGAGDGDPLPHASFSDP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggagcttcctgttctacgacctggagacctggggcacggacccgcggcgcacg
cggatcgcgcagttcgctgccatccgcaccgacgcggaactgaacggactcggcgatccg
atcgagttccttgtccgtccggccgacgacctgctgccttcgccgggcgcgtcgatggtc
accgggctggcgccgcaggatgccttgcacaccggactgtccgaggccgaggccttcgcg
cgcatggtcgaggagatgggccagcccggcacctgcacgctcggctacaactcgctgcgc
ttcgacgacgagttcgtgcgccacgggctgttccgcaacttccacgacccctacgagcgc
gagtggcgcaacggcaactcccgctgggacctgctcgacgtgatgcgcctcgcgcacgcg
ctgcggccggagggcatcatctggcccgtgcgcgaggacggcgcaacctcgttcaggctc
gagcacctggcggaagcgaacggcgtgcgcatgggcgacgcgcacgaggcgctgtccgac
gtgcgcgcgctgatcggtctcgcacggctgttccgcagctctcagccgcggctctgggat
tacgcgctcgccctgcgcgacaagcgccacgtcgcgggcctgctcgatcccttcgcgatg
aggccggtcctgcacgtctcgcagcgctacccggcggcgcggatgtgcgcggcggccgtg
ctgcccttggcgcagcatccgcagatcggcaatcgagtgattgtctacgacctggacgcc
gagcccgacgacctgctggcgctgtcgcccgacgagatcgccgaccgtctttacgtccgc
gccgcggacctgcccgagggcgtggcgcgcgtgccgctgaaggaagtgcacaccaaccgt
tcgccggcgctggtgcgctgggaccacctgcggccggcggacttcgagcgcctcggcctc
gatccggccatcgccgaatcgcgcgccgcgcgcatccgcgagcaggctccgctcatcgcc
gagaaagtccggcaggtcttcgcccgcgagcgcgacgaacgcgcaccgcccgacgtcgac
gccgcgctctacggcggcttcctcggcgacggcgacagggcccggctggcgatggtgcgt
gccacgccaccggggcaactgggcatccgcgacttcggcttccaggacccgcgcctgccg
gaactgctgttccgctatcgcgcccgcaactggcccgacacgctcgacgcggccgagcgg
gcacgctgggacgactaccgccgccggcgcctgtgcgacgactcgggcctgtcggaatgc
agcttcgacgcctatttcaacgacatcgcgcagctgcggggcgagcacgccggccgcctg
gcgctgctcgaccgcctcgaagcctggggccgcgaactcgcggcggacctcgctccggcg
gacgcgactgccggcgcaggcgatggcgacccgctaccccacgcttccttttcagatcca
tga
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