Luteolibacter sp. LG18: llg_00660
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Entry
llg_00660 CDS
T09979
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
lui
Luteolibacter sp. LG18
Pathway
lui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
llg_00660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lui03021
]
llg_00660
03019 Messenger RNA biogenesis [BR:
lui03019
]
llg_00660
Transcription machinery [BR:
lui03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
llg_00660
Messenger RNA biogenesis [BR:
lui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
llg_00660
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Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
HC2
S1CSD-TOTE-2
Spore_III_AA
OB_RNB
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
BCU75351
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All DBs
Position
88002..89939
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AA seq
645 aa
AA seq
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MIHDFNEETLLPFDSIETTGEGSAPARKRAAKKAAAKKTAAKKTAAKKTAKKTTAATDEV
AAPAPAPEPPAAAPVATADTAEAAPVKKKVAKKAAKKAKAATSEEAPARETSPAPVSEPV
QREFIAAPEPAREAPRPPAPREDDSFSNNANSDDQPRKYGRVPGGGPVNQQREPREPREP
RERPQDPPQNREGGDGHGPQDGQRDSRSKRRRDKRKRRRERERDRQSDPRGEGLDSRQSH
PQDSRQGQRPDRGDRNERHDQGERRQPQPQQPQFSGPKVEVNGMLELAPKGFGFLRVPEK
RFEQARDDVFVPPEAVRRHGLRVGHWIHGIAQEGPRGPQLIEITSINGLPPEESRRLPMF
EELKAINPNKRISFETTPDRFTTRVVDIMAPVGRGQRGLIVSPPRSGKTTLLLHMAEAIR
EKYDETLHLMVLLVDERPEEVTEFRRALPGVEIYASSNDDGSRNHCRIAELAIERAKRLV
EAGKDVFLLMDSITRLARAYNHGMRQHGRGTGSGGITVGALEVPRRLFAAARNTRGGGSL
TILATALIQTNSKADEAIFQEFKGTGNMELVLDRKIAENYIYPAVDIFKSGTRREELLLA
DHMLHKIHLIRRGLSGHRPVEAMERLLFFLKKFPNNPQMLLEIKG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatccacgacttcaacgaggaaaccctgctgccgttcgactcgatcgaaacgacagga
gaaggctccgccccggcccgcaaacgcgccgcgaaaaaagccgccgccaagaaaacggca
gccaaaaagaccgccgcgaaaaagaccgcgaaaaagaccaccgccgccacggatgaggtc
gccgctccggcccccgcgcccgaaccgcccgccgccgctcccgttgccaccgcggatacc
gccgaggccgccccggtgaaaaagaaagtcgccaagaaagccgccaagaaggccaaggcc
gcgacctccgaggaagcgcccgcccgcgaaacttctccggcacccgtctcggaacccgtg
cagcgcgagttcatcgccgctccggaacccgcccgcgaagccccccgtccgcccgccccg
cgcgaggacgattccttttccaacaacgccaacagcgacgaccagccccgcaaatacggt
cgcgtgcccggcggtggcccggtgaaccaacagcgggaaccgcgtgagccccgcgaaccg
cgggaacgcccgcaggacccaccgcagaaccgcgagggcggcgacggccatggcccgcag
gacggccagcgcgacagccgcagcaagcgccgccgtgacaagcgcaagcgccgccgcgaa
cgcgagcgcgaccgccagagcgatccgcgcggcgaaggcctggactcccgtcagagccac
cctcaggattcccgccaaggccagcgccccgatcgcggcgatcggaatgaacgccatgac
cagggcgagcgccgccagccgcagccgcagcaaccgcagttctccggcccgaaggtcgag
gtgaacggcatgctggagctcgcgccgaagggtttcggtttcctgcgtgtcccggaaaaa
cgtttcgaacaggcccgcgacgacgtctttgttccgccggaagcggtccgccgccacggc
ctccgtgtcggccactggatccatggcatcgcccaggaaggcccgcgcggcccgcaactc
atcgagatcacctccatcaacggcctgccgccggaggaatcccgccgcctgccgatgttc
gaggagctcaaggcgatcaacccgaacaagcgcatcagcttcgaaaccaccccggaccgc
ttcaccacccgcgtggtggacatcatggccccggtcggccgtggccagcgcggactgatc
gtctccccgccccgctccggcaagaccacgctcctcctccacatggcggaagcgatccgt
gagaaatacgacgagaccctgcacctgatggtgctgctggtggacgagcgcccggaggaa
gtcaccgaattccgccgcgccctgcccggcgtggaaatctacgccagctcgaatgacgac
ggctcccgcaaccactgccgcatcgccgagctcgccatcgagcgcgcgaagcgcttggtg
gaagccggcaaggacgtcttcctgctgatggactccatcacccgcctcgcccgcgcctac
aaccacggcatgcgccagcacggccgcggcaccggctccggcggcatcaccgtcggcgcg
ctggaagtcccccgccgcctcttcgccgccgcccgcaacacccgcggcggaggctcgctc
acgatcctcgccaccgcgctgatccagacgaactcgaaggcggacgaagccatcttccag
gagttcaagggcacgggtaacatggaactcgtcctcgatcgcaagatcgccgagaactac
atctaccccgccgtggacatcttcaagtccggcacccgccgcgaggaactgctgctggcg
gaccacatgctccacaagatccacctcatccgccgcggcctctccggccaccgcccggtc
gaggccatggagcgcctgctgttcttcctgaagaagttcccgaacaacccgcagatgctg
ctcgagatcaagggctga
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