Luteolibacter sp. LG18: llg_04820
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Entry
llg_04820 CDS
T09979
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lui
Luteolibacter sp. LG18
Pathway
lui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
llg_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lui03019
]
llg_04820
03400 DNA repair and recombination proteins [BR:
lui03400
]
llg_04820
Enzymes [BR:
lui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
llg_04820
Messenger RNA biogenesis [BR:
lui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
llg_04820
DNA repair and recombination proteins [BR:
lui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
llg_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCU75767
LinkDB
All DBs
Position
complement(584300..586423)
Genome browser
AA seq
707 aa
AA seq
DB search
MTESPQEPKPLVMTPHEALKRYFGFSGFLDGQESVVDDIVSGRDGLVVMPTGGGKSLCYQ
LPALCFGGVTLVISPLIALMKDQVDALVARGIPATMINSTVPWAEQKERLDGMRDGVYKL
VYVAPERFRAESFLSAVRGANISLFAVDEAHCLSQWGHDFRPDYLRLGKSLDKLGRPQCV
ALTATATPVVREDIVTVLKLREPFERVSGFSRPNLSLGITAVEKAAHKDERMRAVIAAHK
TGIVYCATRKKVEAVSETLASWGVKCIAYHGGLSDSERERAQEIFIQRKADVAVATNAFG
MGIDRSDVRFVVHYEVPGSVEAYYQEAGRAGRDGEAAVCELLFNYADTRTQEFFIDGANP
TPTVIRSIYQYLLNQADKEYEVHRTLDEIAEGADVKNPMSVGSALSVLARGGYIERFDIA
GRRTRGTRMLKPDVLARGLQLDETSIGEKDRRDREKLKAMVEMCYSRICRQQWILGYFGE
EDARTCGSCDVCRDGGAGEARPPTAEEVMVVKKALSGVARMSRRTPDGWEGRYGRGRIVQ
MLCGSRSQEVLTAGLDKLTTYGLLKDRGTGYLNGLMRALSDAGLVKTEPGEYPVVALTPS
GDRVMRGDTNYRLVWPAADEGPANPGLKDHGFDGGLYSMLRDLRAKIADKEEVPPYVVFG
NKTLEAFVLYRPATEEEALKISGVGVVKAQRYLKPFLAAIKTWRKSR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatccccgcaggagccgaaacccctggtgatgacgccccatgaggcgttgaaa
cgctatttcgggttctccggtttcctcgatggccaggaaagcgtggtggacgacatcgtc
tcgggccgggatggcctagtggtgatgccgacgggcggcggaaagtcgctctgctaccag
ctcccggcgctgtgtttcggcggggtcacgctggtgatctcgccgctgatcgcactgatg
aaggaccaggtggatgccctggtggcgcgcgggattccggcgacgatgatcaattccacg
gtgccatgggccgagcaaaaggagcggctcgacggtatgcgggacggcgtttacaagctg
gtctacgtggctccggagcgtttccgcgcggagagtttcctgagcgccgtgcgcggcgcg
aacatctcgctgttcgcggtcgacgaggcccactgcctcagccagtggggccatgacttc
cggccggactacctgcggctgggcaagtccctggacaagctcggccgcccgcagtgcgtg
gccctcaccgccaccgccacgccggtggtgcgggaggacatcgtcacggtgctgaaactg
cgcgagcccttcgagcgggtcagcgggttctcccgcccgaatctctcgctcgggatcacg
gcggtggaaaaggccgcgcacaaggacgagcggatgcgcgcggtgatcgccgcccacaag
acgggcatcgtctattgcgccacccgcaagaaggtggaggccgtgtccgaaacgctggcg
agctggggcgtgaaatgcatcgcctaccacggcgggcttagcgactccgagcgcgagcgc
gcccaggagattttcatccagcgcaaggcggacgtggcggtggcgacgaacgcattcggc
atgggcatcgaccgctcggacgtccgcttcgtggtccactacgaggtgcccggcagcgtg
gaggcctactaccaggaggccggtcgcgcgggccgtgacggcgaggccgcggtgtgcgag
ctgctgttcaactacgccgacacccgcacgcaggagtttttcatcgatggcgcgaacccg
acgcccaccgtcatccggagcatctatcagtacctcctcaatcaggcggacaaggaatac
gaggtccatcgtaccctcgacgagatcgcggagggcgcggacgtgaagaacccgatgtcc
gtgggcagcgctctttcggtgctggcgcgcggcggctacatcgagcgcttcgacatcgcc
ggacgccgcacccgtggcacccgcatgctgaagccggacgtgctggcgcgcggcctccag
ctcgatgaaacctcgatcggtgaaaaggaccgccgcgaccgcgagaagctcaaggcgatg
gtggagatgtgctactcccgcatctgccgccagcagtggatcctcggctacttcggcgag
gaggatgcccgcacttgcgggagctgcgacgtttgccgggacggtggcgcgggggaggcc
cggccgccgaccgcagaggaggtgatggtcgtgaagaaggcgctcagcggcgtggcccgc
atgtcccgccggacgcccgatggctgggagggccggtatggccgcggccgcatcgtccag
atgctgtgcggcagccggtcgcaggaggtgctcaccgccggtctcgacaagctgaccacc
tacggcctgctgaaggaccgtggcaccggctatctcaatggcttgatgcgggcgctgtcc
gatgccggactggtgaagaccgagccgggggaatacccggtggtggccctgactccctcc
ggcgaccgcgtgatgcgcggtgataccaactaccggctggtgtggcccgcggcggacgaa
ggtcccgcgaatccgggcctgaaggaccacgggttcgatggtggcctttattccatgctg
cgggacctgcgggcgaagatcgcggacaaggaggaggtgccgccctacgtggtgttcggc
aacaagacgctggaggccttcgtgctctaccgcccggccaccgaggaggaggcgcttaag
atttccggtgtgggcgtggtgaaggcgcagcgctacctgaagccgttcctggccgcgatc
aagacctggcggaaatcccgctga
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integrated database retrieval system
