Luteolibacter sp. LG18: llg_05760
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Entry
llg_05760 CDS
T09979
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lui
Luteolibacter sp. LG18
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lui03021
]
llg_05760 (rapA)
Transcription machinery [BR:
lui03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
llg_05760 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
Tudor_RapA
ResIII
DEAD
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCU75861
LinkDB
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Position
complement(693774..696512)
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AA seq
912 aa
AA seq
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MRGQRWVSDSEPELGLGIILSGADGRVEIVFPAAGEQRCYALDSAPLRRVRFLPGDRIKT
HTGEEMTVERVREEDGLRIHETEAGDVPEAELCDSISFSKPEERLFGGKLDDVAAFDLRG
EALRRRAAMRRSPVRGLVGARMDLIPHQLFIADEVANRPVPRVLLADEVGLGKTIEACLI
LHRLILTGRAARVLVLLPEPLVHQWFVELHRRFQLTFEIFDESRCEAIEEGDPEGNPFLD
SQWALASIDFLANDERRAEQARDAGWDVLVVDEAHHLEWSPEEPGAAYEMVRSLAAETEG
LLLLTATPQQLGPEGHFARLQLLDPERYSDLERFEQESQHYEEVADLVERIDAGDDIGTA
LDPLVAGRKRLEQSLARYKDGAAGAKEKLVSDLLDGFGMGRVMFRNTRAHLGGFPGREPN
LAKLKGKEGFTAAIAWICKLLKDLGDEKVLIIANTSDLATAVLDAIQEQSGVKGALFHEE
LTLIQRDRNAAYFAEPEGARILVCSEIGSEGRNFQFARHLVLFDVPEDIDVLEQRIGRLD
RIGQKGTIRIHVPYIAGMEEALVRWLDEGLDAFRHSVAGGPEIQREVQGELDKALDGGKP
AAVKKLLARTAEVRAEVTERLARGQDRLLERSSHRPAKSAALVEGIQGWDQDPEFEDFVI
RLFEHSGVEIEELDPRRYFLKPGNLKSDAFPALPDEGITITFDRRRALEHEHEAFMTWDH
PMVRGALDLMLGTGDGNACFALWETGGEKRMLLEAWVVIESIAPAKLHVERFLPQTPVRI
LVDHLGNILTDDATVAAAKLRRSESKGLLKNESVKRKVLPAMLTKIREIAIEQSQPIIRA
AQETMFLELSTEISRLKDLAGVNDHVRPEEIAALESRKAELAKAISSARPRIDAVRLIWK
APAVPKKEKDPE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggacagcgctgggtcagtgacagtgagcccgagctgggcctcggaatcatcctc
agcggtgccgatggccgggtggagatcgtgttccccgccgcgggtgaacagcggtgctat
gccctcgattccgcgccgctgcgccgtgtccgcttcctgccgggcgaccgcatcaagacc
cacaccggcgaggagatgaccgtcgagcgcgtgcgcgaggaagacggcctccgcatccac
gagaccgaggccggggacgtgccggaagccgaactctgcgactccatcagcttcagcaag
ccggaagaacgcctcttcggcggcaagctcgatgacgtcgccgccttcgatctccgcggc
gaagccctgcgccgccgtgccgccatgcgccgctcgccggtgcgcgggctcgttggcgcg
cgcatggacctcattccgcaccagcttttcatcgccgatgaggtggcgaaccggccggtg
ccgcgcgtcctgctcgcggacgaggtcggcctcggcaagaccatcgaggcctgcctgatc
cttcaccgcctgatcctcaccggccgcgccgcgcgcgtgctggtcctgttgccggagccg
ctggtccaccagtggttcgtggagctccaccgccgcttccagctcaccttcgagatcttc
gatgaaagccgctgcgaggcgatcgaggaaggtgatccggagggcaacccgttcctcgac
agccagtgggcgctcgcgtccatcgacttcctcgcgaatgacgaacgccgtgccgagcag
gcccgtgatgccggttgggacgtgctcgtcgtcgatgaggcccaccacctcgaatggtcg
ccggaggaacccggtgccgcctacgaaatggtgcgctcgctcgccgcggaaaccgagggt
ctgctgctcctcaccgcgaccccgcagcagctcggaccggaaggccacttcgcccgcctc
cagcttctcgatcccgagcgttactcggacctggagcgcttcgagcaggaatcgcagcac
tacgaggaagtcgccgatctggtcgagcgcatcgacgccggtgacgacatcggcaccgcg
ctcgatccgctcgtcgccggccgcaagcgccttgaacaatcgctcgcccgctacaaggac
ggcgcggcaggcgcgaaggagaagctcgtgtccgacctgctcgatggcttcggcatgggc
cgcgtgatgttccgcaatacccgcgctcacctcggcggtttccccgggcgcgagccgaac
ctggcgaagctgaagggcaaggagggcttcaccgccgccatcgcctggatctgcaagctg
ctcaaggatctcggcgacgaaaaggtgctcatcatcgcgaatacctccgacctcgccacc
gccgtgctagacgccatccaggagcaatccggcgtgaagggcgcgctcttccacgaggag
ctgaccctgatccagcgcgaccgcaatgccgcctacttcgccgagccggagggcgcgcgc
atcctggtgtgctccgagatcggcagcgaaggccgcaatttccaattcgcccgccacctc
gtgctcttcgatgtgcccgaggacatcgacgtgctggaacagcgcatcggccgcctcgac
cgcatcggccagaagggcaccatccgcatccacgttccgtacatcgcgggcatggaggag
gcgctcgtccgctggctcgatgaaggcctcgatgccttccggcacagcgtggccggtggt
cccgagatccagcgcgaggtccagggtgaactcgacaaggcgctcgatggcggcaagccc
gccgcggtgaagaagctcctcgcccgcaccgccgaggtccgcgccgaggtcaccgagcgt
ctcgcccgcggccaggaccgcctgttggagcgcagctcgcaccgccccgcgaagtccgcc
gcccttgtggaaggcatccagggttgggaccaggacccggagttcgaggacttcgtcatc
cgcctgttcgaacacagcggggtggagatcgaggagcttgatccgcgccgctatttcctg
aagcccggcaacctcaagtccgatgccttccccgcgctcccggacgagggcatcaccatc
accttcgaccgccgtcgcgcgctggagcacgaacacgaggccttcatgacctgggaccac
ccgatggtccgcggcgcgctcgacctcatgctcggcaccggcgatggcaatgcctgcttc
gccctctgggaaaccggcggcgaaaagcgcatgctgctcgaagcctgggtcgtcatcgag
tccatcgctcccgcgaaactccacgtcgaacgcttcctgccgcagacacccgtccgcatc
ctcgtcgaccacctcggcaacattctcaccgatgacgccaccgtggccgccgccaagctc
cgccgcagcgagtcgaagggcctgctcaagaacgagtcggtgaagcgcaaggtgctgccc
gccatgctcacgaagatccgcgagatcgccatcgagcagagccagccgatcatccgcgcc
gctcaggaaaccatgttcctggagctctccacggaaatctcccgcctcaaggacctcgcg
ggcgtgaacgatcacgtccgccccgaggaaatcgccgccctggagtcccggaaggccgaa
ctggccaaggccatctcctccgcccgtccgcgcatcgacgccgtccgcctcatctggaag
gcccccgccgtgccgaagaaggaaaaggatccagagtag
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