Luteolibacter sp. LG18: llg_13950
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Entry
llg_13950 CDS
T09979
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lui
Luteolibacter sp. LG18
Pathway
lui03030
DNA replication
lui03430
Mismatch repair
lui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
llg_13950
03430 Mismatch repair
llg_13950
03440 Homologous recombination
llg_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lui03032
]
llg_13950
03400 DNA repair and recombination proteins [BR:
lui03400
]
llg_13950
Enzymes [BR:
lui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
llg_13950
DNA replication proteins [BR:
lui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
llg_13950
DNA repair and recombination proteins [BR:
lui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
llg_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF3726
Motif
Other DBs
NCBI-ProteinID:
BCU76680
LinkDB
All DBs
Position
complement(1652928..1656404)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSDSFVHLHLHTEYSLLDGMIRTKDLAKKAVDYGMPAVAMTDHGNLYGAIEFHQSCKKAG
VKPIFGCEIYLAPASRHDKRDLVGRKRSTHMTLLARDIEGWNNLSKLVSRGHLDGLYYGK
PRVDYESLAEFSKGVTCLSGCISGPVNEWLLAGDEDKARETLSTLKDIYGGEHTWVEIHN
HGLEAQQKVTPGLLKLAKELELRPVAANDVHFLNRDDHEAHDVMICIGTGHLLIDENRMR
YTPEVHFKTAEEMRHLFREIPGACDATLEIAEQCNVAIKLDSTSSEKYPQFPTPDGSPRE
EYLMRVCQKGMVKRYGEEGAVDPEKVTRLKYEVDIINQLGFASYFLITADFIQWARDHDI
PVGPGRGSAAGSLVAYSMGITDICPLQFGLLFERFLNPERVSPPDVDIDFCQSRRPEVID
YVRHKYGERSVSHIITYGTLGAKSVLRDVARVMGVSYGEADRIAKMIEAKPGISLDGEWK
AKPEIKEMIESSSTYQELWGYALKLEGLVRNVGVHAAGVVIGDRPLDEHVPLTRASEGEV
VTQYDMGAITDVGLLKMDFLGLKNLTVIQDAVEHIKVHIPDFDITKVPLDDQPTFDLLNR
GETMGVFQLESGGMVETCRKYQIEKIDDIIDLLALYRPGAMQFIDQMIEVKKGRKQAVYE
HPLLEKVCGNTYGVMIYQEQVQNAAKLLAGYTLGGADLLRRAMGKKDPKKMAEERSKFVA
GAAATNGIGEKLANQIFEKIEMFAGYGFNKSHSACYGHISYWTAYLKANHPVEFLAGLLS
NEIHNTDKIGVFVAECHRMGIEILPPNLNASKLRFAPESTPTGGRGIRYGLAAIKNCGEG
AMAAAIEERQTKGPFVSLEDFATRLDSKSVNKRILENLVKAGALDWTGETRAGMFSRLEQ
VVASASSTQKDRAAGQVSLFDALDFVAPVQTAKTSVAAVPEWPKDDRLAHEKELLGFYVT
GHPLDKFRGVIDSDRYHRLGLVDELDTSNPRARFPFAGMIRSLESKVTKTGKPFGVLILE
DFTGSSEIMLWGETFVPARDNGILEAGKIIKLKCSVQVDDRTGGYRLTGYELGELKPKRT
SEANAAKGPLELTLWTTRHSERDIDQIRKALVNHPGQTPVLLHIQNSAGRRITVEAGEKF
HVKRGPALAEALDRWLED
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcgttcgtccacctccacctccacaccgaatactccctgctcgacggcatg
atccgcaccaaggatctggccaagaaggcggtcgactacgggatgccggcggtggcgatg
acggaccacggcaacctctacggcgcgatcgaattccaccaatcctgcaagaaggccggg
gtgaagccgatcttcggctgcgagatctacctcgcgcccgcgtcccgccacgacaaacgc
gacctggtgggacgcaagcgctccacccacatgaccctgctggcccgcgacatcgagggc
tggaacaacctcagcaagctggtgtcccgcggccacctcgacggcctctactacggcaag
ccgcgcgtggactacgaatccctggccgagttttcgaagggcgtgacctgcctgtccggc
tgcatttccgggccggtgaacgagtggctgctggccggcgacgaggacaaggcccgcgag
acgctgtccaccctgaaggacatctacggcggcgagcacacctgggtggagatccacaac
cacgggctggaggcccagcaaaaggtcactcccggcctgctgaagctggcgaaggagctg
gagctgcgcccggtggccgccaacgacgtccatttcctcaaccgcgacgaccacgaggcg
cacgacgtgatgatctgcatcggcaccggccacctgctgatcgatgagaaccggatgcgc
tacaccccggaggtccatttcaagaccgccgaggagatgcgccacctcttccgggagatc
ccgggagcctgcgacgccaccctggagatcgccgagcagtgcaacgtggccatcaagctg
gactccaccagctccgagaaatacccgcagttccccactcccgacggttccccgcgcgag
gagtacctgatgcgcgtctgccagaagggcatggtgaaacgctacggcgaggagggcgcg
gtcgacccggagaaggtgacccgcctgaagtacgaggtggacattatcaaccagctcggg
ttcgcgtcctacttcttgatcaccgcggacttcatccaatgggcccgcgaccatgacatc
ccggtgggcccgggccgtggttcggccgccggttcgctggtggcctactcgatggggatc
accgacatctgcccgctccagttcggtctgctgttcgagcgcttcctcaatcccgagcgc
gtcagcccgcccgacgtcgacatcgacttctgccaaagccgccgtccggaggtgatcgac
tacgtgcgccacaagtacggcgagcgcagcgtgtcccacatcatcacctacggcaccctc
ggcgcgaagagcgtgctgcgggacgtggcccgcgtgatgggcgtgtcctacggcgaggcc
gaccgcatcgccaagatgatcgaggcgaagccgggcatcagcctggacggcgagtggaag
gccaagcccgagatcaaggagatgatcgagagctcctccacctaccaggagctgtggggc
tacgcgctgaagctggaaggcctggtccgcaacgtgggcgtccatgccgcgggcgtggtg
atcggggaccggccgctggacgagcacgtccccctcacccgcgcgagtgaaggcgaagtc
gtgacccagtacgacatgggcgcgatcaccgacgtgggcctgctgaagatggacttcctg
ggcctgaagaacttgaccgtcatccaggacgcggtggagcacatcaaggtccacatcccg
gacttcgacatcaccaaggtgccgctggacgaccagccgaccttcgacctgctgaaccgc
ggcgaaacgatgggcgtgttccagcttgaatccggcggcatggtcgagacctgccggaag
taccagatcgagaagatcgacgacatcatcgaccttctggcgctctaccgcccgggcgcg
atgcagttcatcgaccagatgatcgaggtgaagaagggccgcaagcaggcggtctacgag
cacccgttgctcgagaaggtctgcggcaacacctacggcgtcatgatctaccaggagcaa
gtgcagaacgccgcgaagctgctggcgggctacacgctcggcggcgccgaccttctgcgc
cgcgcgatgggtaagaaggacccgaagaagatggcggaggagcgctcgaaattcgtcgcg
ggcgcggccgccaccaacggcatcggcgagaagctggcgaaccagatcttcgagaagatc
gagatgttcgcgggttacggcttcaacaagtcccactccgcctgctacggccacatctcc
tactggaccgcctacctgaaggcgaaccacccggtggaattcctcgccggcctgctctcc
aacgaaatccacaacaccgacaagatcggcgtcttcgtggcggagtgccaccgcatgggt
atcgagatcctgccgccgaacctcaacgcgtcgaagctgcgcttcgccccggagtccacc
ccgaccggcggccgcggcatccgctacggcctggccgcgatcaagaactgcggcgaaggc
gcgatggccgccgcgatcgaggagcgccagaccaagggcccgtttgtctcgctggaggac
tttgccacccgtctcgattcgaagtcggtgaacaagcgtatcctcgaaaacctggtgaag
gccggggcgctcgactggaccggcgaaacccgcgccgggatgttcagccgcctggagcag
gtggtggcctccgcgtcctccacccagaaggaccgcgccgccggccaggtgtcgctgttc
gacgcgctcgatttcgtcgcgcccgtgcagaccgcgaagacctccgtggccgcggtgccg
gagtggccgaaggacgaccggctggcccatgagaaggagctgctcggcttctacgtcacc
ggccatccgctggacaaattccgcggcgtgatcgactccgaccgctaccaccgcctcggc
ctggtcgacgagctggacacttccaacccgcgcgcgcgtttccccttcgccgggatgatc
cgcagcctggaatcgaaagtcaccaagaccggcaagcccttcggcgtgctgatcctggag
gacttcaccggcagctcggagatcatgctgtggggtgaaaccttcgtgcccgcccgcgac
aacggcatcctggaggccggcaagatcatcaagctgaagtgctcggtgcaggtggacgac
cgcaccggcggctatcgcctcaccggctacgaactcggcgagctgaagccgaagcgcacc
tccgaggccaacgccgcgaagggaccgctggagctgacactgtggaccacccgccacagc
gagcgggacatcgaccagatccgcaaggcactggtgaatcacccgggccagacaccggtg
ctattgcacatccagaacagcgccggccgccgcatcaccgtcgaggccggggaaaaattc
cacgtcaagcgcggcccggcgttggccgaggcgctggaccggtggctggaggattga
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