Luteolibacter sp. LG18: llg_21500
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Entry
llg_21500 CDS
T09979
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lui
Luteolibacter sp. LG18
Pathway
lui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
llg_21500 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lui03019
]
llg_21500 (pnp)
03016 Transfer RNA biogenesis [BR:
lui03016
]
llg_21500 (pnp)
Enzymes [BR:
lui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
llg_21500 (pnp)
Messenger RNA biogenesis [BR:
lui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
llg_21500 (pnp)
Transfer RNA biogenesis [BR:
lui03016
]
Prokaryotic type
tRNA degradation factors
llg_21500 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
BCU77435
LinkDB
All DBs
Position
2565541..2567682
Genome browser
AA seq
713 aa
AA seq
DB search
MNIHSITAEVGSNPITIETGKLAKLADGAVTVRSGDTIILVTAVSATKVKDGQTWFPLSV
EYKEKASAAGVFPGGYFKREGRPTEKEILTCRMTDRPLRPLFPKGYFYDTQIVAILLSAD
AINDADILSMNGASAALCLSDIPFAGPIGAVRVGRVDGQFVINPTFDERENSDLDLVYVG
NKTDVIMIEGAADELPEEEFVKALHFAQEAVQKLVAVQEELVRLAGKPKRDYTPVLAKEN
LLEIAYEIAGDRIEGAIYAPTKVERAKKVGALRDEVEAAIKERAPEATAFDVEQAFEYLQ
KKAFRISIMEKGLRADGRNPSQLRNLYAEANVLPRVHGSAIFSRGETQALAIATLAPGDE
KQFIDNYAGGESEKRFILHYNFPPFSVGETGRMGGLNRREIGHGALAERSIQPVLPHPDE
FPYAIRVSSEVTESNGSTSMATVCSGTMSLLSAGVPLIRPVAGISVGLVTEFNEAGAMEK
YIPLLDIIGSEDFYGDMDFKLCGTSHGVTGYQLDLKLPGIPLSILAEAVTIAKNARTPIL
EKMAEAIPAHGELSPHAPRIVSIKIPADRIGELIGPGGKNIKGIQAESGAEVSIEDDGTV
RIYASKQEGLDRAKSLIERMFQEIEVGKVYTGKVVSITAFGAFMEVLPGKDGLVHVSELA
EGRTENVEDIVKKGDLITAKCIGVDEKGRVKMSRRAYLRDQKAEQVEAAPAEA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcactccatcacggccgaagtcggctccaacccgattacgatcgaaaccggc
aaacttgccaaactcgccgacggtgccgttaccgtccgctccggtgacaccatcatcctc
gtcaccgccgtctccgccaccaaggtgaaggacggtcaaacctggttccccctttccgtc
gagtataaggaaaaggcctccgccgccggcgtgttcccgggtggctacttcaagcgtgaa
ggccgtccgaccgagaaggaaatcctcacctgccgcatgacggaccgcccgctgcgtccg
ctgttcccgaagggttacttctacgacacccagatcgtcgccatcctcctcagcgcggac
gcgatcaacgacgccgacatcctctcgatgaacggtgcttccgccgccctctgtctttcc
gacatcccgttcgccggcccgatcggcgcggtgcgcgtcggccgcgtcgatggccagttc
gtcatcaacccgaccttcgacgagcgcgagaacagcgatctcgacctcgtttacgtgggt
aacaagaccgacgtgatcatgatcgaaggtgctgccgacgaacttccggaagaggagttc
gtgaaggcccttcacttcgcccaggaagccgtccagaagctggtggccgtccaggaagag
ctcgtccgcctcgccggcaagccgaagcgcgattacaccccggtgctcgccaaggagaac
ctcctcgagatcgcctacgaaatcgccggcgaccgcatcgaaggtgccatctacgccccg
accaaggtcgagcgcgcgaagaaggtcggcgccctccgcgacgaagtcgaagccgcgatc
aaggagcgcgctccggaagccaccgcgttcgacgtcgagcaggcgttcgaatacctccag
aagaaggccttccgcatctccatcatggagaagggcctccgcgccgacggccgcaacccg
agccagctccgcaacctgtatgccgaagccaacgtgctgccgcgcgtccacggttccgcc
atcttctcccgcggtgagacccaggccctcgccatcgcgaccctcgcgccgggcgatgag
aagcagttcatcgacaactacgccggtggcgagagcgagaagcgcttcatccttcactac
aacttccctccgttctccgtcggtgaaaccggccgcatgggtggcctgaaccgccgcgaa
atcggccacggcgcgctcgccgagcgctcgatccagccggtgctgccgcacccggacgag
ttcccctacgcgatccgcgtgtcctccgaagtgaccgagtcgaacggctcgacctcgatg
gccaccgtgtgctccggcaccatgtcgctcctcagcgccggtgtcccgctcatccgcccg
gtcgccggtatctccgtgggtctcgtcaccgagttcaacgaagccggtgccatggagaag
tacatcccgctgctcgacatcatcggcagcgaggacttctacggtgacatggacttcaag
ctctgcggcaccagccacggtgtcaccggctaccagctcgacctgaagctcccgggtatc
ccgctctcgatcctcgcggaagccgtgacgatcgcgaagaacgcccgcacgccgatcctt
gagaagatggccgaggccatcccggcccacggcgagctcagcccgcacgccccgcgcatc
gtctcgatcaagatcccggcggatcgcatcggcgagctcattgggcctggcggcaagaac
atcaagggcatccaggccgagtccggcgcggaagtcagcatcgaagacgacggcaccgtg
cgcatctacgcctccaagcaggaaggcctcgaccgcgcgaagtcgctcatcgagcgcatg
ttccaggaaatcgaagtcggcaaggtctacaccggcaaggtcgtcagcatcaccgccttc
ggcgccttcatggaagtgctcccgggcaaggacggcctcgtccacgtctccgagctggcc
gaaggccgcaccgagaacgtcgaggacatcgtcaagaagggcgatctcatcaccgccaag
tgcatcggcgttgatgagaagggccgcgtgaagatgagccgccgcgcttacctccgcgac
cagaaggccgagcaggttgaagccgctccggccgaagcctga
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