Luteolibacter sp. LG18: llg_22700
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Entry
llg_22700 CDS
T09979
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
lui
Luteolibacter sp. LG18
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lui03019
]
llg_22700
Enzymes [BR:
lui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
llg_22700
Messenger RNA biogenesis [BR:
lui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
llg_22700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
nSTAND_NTPase5
FtsK_SpoIIIE
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
BCU77555
LinkDB
All DBs
Position
2721177..2724827
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AA seq
1216 aa
AA seq
DB search
MNYPAALPVVAHRDEIVAAIRAHPVVVVVSETGSGKTTQLPKMVVEALGQDPRRIGCTQP
RRLAAASVAKRVAEELKVPLGGFVGYQVRFEEKMSRETRIKFMTDGILLAETQGDRSLKQ
YGALILDEAHERSLNIDFLLGYLKGLLETRRDLKLVISSATLDAGAFSEFFGGCPVIEAP
GRTFPVQEVSLPGDEDEELSSQVVRGVEWLNDVDPRGDVLVFLPGEREIRECADALVGQR
YPNTEILPLFARLGLADQQKVFNPGRQRRIILATNVAETSLTIPGIVCVIDSGLARISRW
SPGRGVQRLQVEPVSQASARQRKGRCGRVREGICVRLYDESDLTDRPEFNDPEIRRSSLA
GVILRMKSLGLPPIEEFPFLDPPAPKAISEGYRTLREVGALDEDKELTEAGRQMSRLPVD
PRLGRMLLEAREEGCLAEILPIVSGLESNDPRERPPEKAKEADQAHARWKDDQSDFTGML
RLWIDVNRFREGRNWKRNALRKYCKDAFLNFRRVTEWANVHDELAELLTRELKWKLQPLA
ATVEKAATYPAIHCALLSGAPRQFGLWDRDSKSYKSASGGFFAIFPGSGLFGGKRWEWVM
GMELVETSRLWARRVARIDPEWIEKVAPHLCRSRYGEAYWDEPHGVVYGKQTVICGGLPI
IVGRRVHYGRVDHKAARQIFLREGLMAGKLRRKAEYQARMEELREEIGAIEQKLRRPGGL
WSEEAVEAFFEKAIPNEIATASAFNKWADKNGEALMLSTTDVVLEDLDDLGLESYPDSIQ
RDGEEYTLYYHAAPGERDDGVTIGVHIDQLPHLPDWLPAWGVGGDLRERVEILIRSLPKD
LRRVCQPVSEMTDSFTCLWQDAPPDDALDKVLAAHLRERTRYPIEPKDFDFSKLPPELVT
KVWVCDDEGREMAFGTDVAALKMKLAGRLKSRFEAAANESWERRGMNAWDGEALPLRSET
SAGVAYPALVDEGGSIGVRAFSNEEEAFQAHRGGCVRLLHLAQADQVNHLRKRFPLGMVA
KIELPRLGVGGTAVEDLIALAAEGAMGRVLPRSPAEFHKTAQNARGLWHDAAAKIGHALD
EMLVHLPEIRRWLDAHRGNRNYDEIVRDVDEELSWLFRARFAWRAGFARFLDYPRRLRAI
RSRLGRVDSLPLVKDLEKVDRFVKFWDPWMNRWVAKPEDPRLWDHGWQLEEFRVSLFAPD
VPVLAKVSEKKLAEFV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
ttgaactacccggcggcgctgccggtggtcgcgcaccgcgatgagatcgtggcggcaatc
cgtgcccatccggtggtggtggtggtcagcgagaccggttccggcaagaccacccagctt
ccgaagatggtggtcgaggcgctcggccaggacccgcggcggatcggctgcacccagccg
cggcgtctggcggcggcgagtgtggcgaagcgcgtggccgaggagctgaaggtgccgctc
ggcgggtttgtgggctatcaggtccgtttcgaggagaagatgtcccgcgagacgcggatc
aaattcatgacggacggcatcctgctcgcggagacgcagggcgaccgctcgctgaagcaa
tacggcgcgctgatcctcgacgaggcgcacgagcgctcgctgaacatcgatttcctgctc
ggctatctgaaggggctgctcgaaacgcggagggacctgaagctggtgatttcgtccgcc
acgctggacgccggggcgttctcggaattcttcggtggctgcccggtgatcgaggctccc
ggccggactttcccggtgcaggaggtcagcctgccgggcgacgaggatgaggagctttcg
agccaggtggtgcgcggagtggagtggctgaacgacgtcgatccacgcggtgacgtgctg
gtgttcctgcccggcgagcgtgagatccgcgagtgcgcggatgcgctggtgggccagcgt
tatccgaacacggagatcctgccgctgttcgcgcggctcggtctcgcggatcagcagaag
gttttcaatcccggtcgccagcgccggatcatcctcgccaccaacgtcgccgaaacctcg
ctgacgatcccggggatcgtgtgcgtgatcgactccggtctggcgcgcatcagccgctgg
agcccgggccgcggggtgcagcgcctccaggtcgaaccggtcagccaggccagcgcccgc
cagcgcaagggccgctgcggccgcgtgcgcgagggcatctgcgtgcggctctacgatgag
tccgatctcacggaccgcccggagttcaacgacccggagatccggcgcagctcgctggcg
ggggtgatcctgcggatgaagtcgctggggctgccgccgatcgaggaattcccgtttctc
gatccgcccgcgccgaaggctatctccgaggggtatcgtacgttgcgggaggtcggcgcg
ctggacgaggacaaggaactcaccgaggcgggccgtcagatgtcgcgcctgccggtggat
ccgcgcctgggccggatgttgctggaggcgcgcgaggagggttgcttggcggaaatcctg
ccgatcgtgtccgggctggaatcgaacgacccgcgcgagcgcccgcccgagaaggcgaag
gaagccgaccaggcgcatgcccgttggaaggatgaccagagcgacttcaccggcatgctg
cgcctgtggatcgacgtgaaccgtttccgcgagggacggaactggaagcgcaatgccctg
cggaaatactgcaaggacgcgttcctcaatttccgccgcgtgaccgagtgggcgaacgtc
cacgacgagctcgccgagctgctgacgcgtgagctcaaatggaagctccagccgctggcg
gcgacggtcgagaaggcggcgacctatcccgcgatccattgcgcgctgctgtccggagcc
ccgcgccagttcggcctgtgggaccgggattcgaagtcctacaagagcgcctcgggcgga
ttcttcgcgatcttcccgggctccggcctgttcggcgggaaacgctgggagtgggtgatg
ggcatggaactcgtcgagacgtcccggctgtgggcccggcgcgtggcgcgcatcgatccg
gagtggatcgagaaggtcgcgccgcacctgtgccgcagccgctatggcgaggcgtattgg
gatgaaccgcatggcgtggtgtatggcaagcagacggtcatctgcggcggcctgccgatc
atcgtggggcggcgcgtgcactacggccgcgtggaccacaaggcggcgagacagattttc
ctgcgcgagggcctgatggccgggaagctgcgccgcaaggcggagtaccaggcgcggatg
gaggaactgcgggaggagatcggcgcgatcgagcagaagctgcgtcgacccggtggcctg
tggagcgaggaggcggtggaggcgttctttgaaaaggcgatcccgaatgagatcgccacc
gcgtccgccttcaacaagtgggcggacaagaacggcgaggcgctgatgctttccaccacc
gacgtggtgctggaggatctggacgatctcgggctggagtcgtatccggactcgatccag
cgcgatggcgaggaatacacgctctactaccacgccgcgcccggcgagcgggacgatggg
gtgaccatcggagtccacatcgaccagctcccgcatctcccggactggttgccggcgtgg
ggcgtgggcggggacctgcgtgagcgggtggagatcctgatccgctcgctgccgaaggac
ctgcgccgtgtttgccagccggtgtccgagatgacggacagcttcacctgcctgtggcag
gacgcgccgccggacgatgcgctcgacaaggtgctggccgcgcatctgcgcgagcgcact
cgctatccgatcgagccgaaggatttcgatttcagcaagctgccgccggaactggtgacg
aaggtgtgggtctgcgatgacgagggccgtgagatggccttcggcaccgacgtggccgcg
ctgaagatgaagctggcgggtcgactgaagtcccgcttcgaagccgcggcgaacgagtcg
tgggaacgccgggggatgaacgcgtgggacggcgaagcgctgccgctgcgttccgaaacg
tccgccggggtcgcgtatccggcgctggtggacgaaggcggatcgatcggcgtgcgggcg
ttttcgaacgaggaggaggcgttccaagctcatcgcggcggctgcgtgcggttgctgcac
ctcgcccaggccgaccaggtgaaccatttgcggaaacgcttcccgctggggatggtcgcg
aagatcgagctgccgcgcctcggggtgggcggcaccgccgtcgaggacctgatcgcactg
gccgcggaaggggcgatggggcgggtgctgccgcgttcgcccgcggagtttcacaagacg
gcgcagaacgcccgcgggctgtggcacgatgcggccgcgaagatcggccacgcgctcgat
gagatgctcgtccatttgccagagatccgccgctggctggacgcccatcgcggcaaccgg
aactacgacgagatcgtgcgggatgtggacgaggagctttcgtggctgttccgcgctcgg
ttcgcgtggcgggcggggttcgcacgcttcctcgattatccacggcgcttgcgggcgatc
cggtcgcggctcgggcgggtggattcgttgccgctggtgaaggatctggagaaggtggac
cgctttgtgaagttctgggacccgtggatgaaccgttgggtggccaagccggaggacccg
cggctgtgggaccacggctggcagttggaggagttccgcgtctcgctcttcgcgccggac
gtgccggtgctggcgaaggtgtcggagaagaagctggcggagtttgtttga
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