Luteolibacter sp. LG18: llg_43970
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Entry
llg_43970 CDS
T09979
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lui
Luteolibacter sp. LG18
Pathway
lui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
llg_43970 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lui03021
]
llg_43970 (rpoA)
03400 DNA repair and recombination proteins [BR:
lui03400
]
llg_43970 (rpoA)
Enzymes [BR:
lui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
llg_43970 (rpoA)
Transcription machinery [BR:
lui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
llg_43970 (rpoA)
DNA repair and recombination proteins [BR:
lui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
llg_43970 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BCU79682
LinkDB
All DBs
Position
complement(5500896..5501975)
Genome browser
AA seq
359 aa
AA seq
DB search
MSVKLSRFEIPNRLVRNEDTATDVYAQFSAEPFERGYGHTLGNSLRRVLLSSLEGAAITS
VRIAGVQHEFSSLPGVVEDVTDIILNLKKVKFLHHDKDSRILSIKIEKEGVVTAGDIQGD
HVFEVVNKDQVICTLDKKVKFDCEFEVRVGRGFSTGDENKRKDQPIGVIAIDSIFSPVTR
VKYAVDTTRVGQMTDYDKLVLDIWTDGRITPQDALLQASAILRHHLDVFVNYDENAVDFE
EAPMESSEENAALKKLLNMSVNEIELSVRAANCLNNANITSVGQLAMKTEAEMLKYRNFG
KKSLNEIKDKLVELGLGLGMSFDPSLLTGPSASARAPRLGVEEEAPVGLADLIAQNLDD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttaaactgtctcgattcgagatcccgaaccgcctcgtccgcaacgaggacacc
gccaccgacgtttacgcccagttcagcgccgaacctttcgagcgcggctacggccacacc
ctcggcaactcgctccgccgcgtcctcctgtcctccctcgaaggcgccgccatcacctcc
gtccgcatcgcgggcgtgcagcacgagttctccagcctcccgggcgtggtggaagatgtc
acggacatcattctcaatctcaagaaggtgaagttccttcaccacgacaaggactcccgc
atcctctcgatcaagatcgagaaggaaggcgtcgtcaccgccggtgacatccagggcgac
cacgtgttcgaagtcgtcaacaaggaccaggtgatctgcaccctcgacaagaaggtgaag
ttcgactgcgagttcgaagtccgcgtcggccgtggtttctccaccggtgacgagaacaag
cgcaaggaccagccgatcggcgtgatcgccatcgactcgatcttctccccggtgacccgc
gtgaagtacgcggtcgacaccacccgcgtcggccagatgaccgactacgacaagctggtg
ctcgacatctggacggacggccgcatcaccccgcaggacgccctcctgcaggcttccgcg
atcctccgccaccacctcgacgtgttcgtcaactacgacgagaacgccgtggacttcgaa
gaggctccgatggagtccagcgaggagaacgccgcgctgaagaagctgctcaacatgtcg
gtcaacgagatcgagctttcggtccgcgccgccaactgcctcaacaacgccaacatcacg
tccgtgggccagctcgcgatgaagacggaggcggaaatgctcaagtaccgcaacttcggc
aagaagtcgctcaacgagatcaaggacaagcttgtcgaactcggcctcggcctcggcatg
tccttcgatccgtcgctcctcaccggcccgagcgcttcggcgcgcgccccgcgcctcggc
gtggaggaagaggccccggtgggtcttgccgacctgatcgcccagaacctcgacgactga
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