| Entry |
|
|---|
| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
|
|---|
| KO |
|
|---|
| Organism |
luj Luteimonas sp. JM171
|
|---|
| Pathway |
|
|---|
| Brite |
Enzymes [BR:luj01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BGP89_00875
Transcription machinery [BR:luj03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BGP89_00875
DNA repair and recombination proteins [BR:luj03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BGP89_00875
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(178204..182361)
|
|---|
| AA seq |
1385 aa
MTTTYSFTEKKRIRKDFGKQKSILEVPYLLAIQVDSYRDFLQADKQPSKREDRGLHAALK
SVFPIVSYNGYAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDRESSSKAI
KYVKEQEVYMGEIPLMTDNGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSA
RIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTILLRALGYSNEEMLNEFFEINTFHIDP
KEGVQVELVPERLRGETLDFDLADGDTVIVEAGRRITARHIRQLEQSGIEALAVPDDYLL
GRTLSHDVPDTETGELLAAANDEITEEHLAAFRKAGVTTIGTIWTNDLDRGPYISNTLRI
DPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSAVGRMKFNRRLGRKE
TEGAPVLYDARYFAERKDDESVKLREEYGDSSDILDVIKVLTEIRNGRGVVDDIDHLGNR
RVRSVGEMAENTFRVGLVRVERAVRERLTMAEADGLTPQELINAKPVAAAVKEFFGSSQL
SQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGL
INSLAVFARTNRYGFLETPYRKVVDGKVTDEIEYLSAIEENDYVIAQANAPLDDEGRLTE
QFVDVRYQGENMLKPPAEVHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVP
TLRAEKPLVGTGIERAVARDSGVTVNARRGGVVEQVDAGRIVVKANEDELSGEQDAGVDI
YSLVKYTRSNQNTCINQRPLVHVGDVVERGDVLADGPSTDIGELALGQNMLVAFMPWNGY
NFEDSILLSERVVTEDRYTTIHIEELTAVARDTKLGPEEISSDIPNVSEQALNRLDESGV
VYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVID
VQVFTRDGIEKDKRARQIEESEIKRVKKDFDDQFRILEAAIYARLRSQLIGKTANGGAGL
KKGETVTSLVLDGLKKSDWFNIRMKDAEAVEAIERAQMQIETHRKEFDKRFEDKRAKITQ
GDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSAIVPVQDMPYMADGETVDIVL
NPLGVPSRMNIGQILETHLGWAAKGLGRKIQGMLEAQAKINDLRKFLDQIYNHDSDITAQ
QVDLDQFSDEELLTLARNLTGGVPMATPVFDGAAESEIKKMLELADLPTSGQTRLFDGRT
GEQFEREVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINM
ELEED |
|---|
| NT seq |
4158 nt +upstreamnt +downstreamnt
atgacgacaacctattcattcaccgaaaagaagcgcatccgcaaggacttcggcaagcag
aagtcgatcctggaagtgccgtacctgctcgccatccaggtggactcgtaccgcgatttc
ctccaggccgacaagcagccgtccaagcgcgaggaccgcggcctgcacgccgcgctcaag
tcggtgttcccgatcgtcagctacaacggctatgccgcgctggagtacgtggggtacaag
ctgggcgagccggtgttcgacgagcgcgagtgccgccagcgcgggatgagctacggcgcc
ccgctgcgggtgaccgtgcgcctggtgatctatgaccgcgaatcctcctccaaggccatc
aagtacgtgaaggagcaggaggtctacatgggcgagatcccgctcatgaccgacaacggc
accttcatcgtcaacggcaccgagcgggtcatcgtctcccagctgcaccgctcgccgggc
gtgttcttcgaccacgaccggggcaagacccacagctcgggcaagctgctctacagcgcc
cgcatcattccctaccgcggctcgtggctggacttcgagttcgacccgaaggacgcgctg
ttcacccgtatcgaccgtcgccgcaagctgccggtgacgatcctgctgcgtgcgctgggc
tactccaacgaggagatgctcaacgagttcttcgagatcaacaccttccatatcgatccg
aaggaaggcgtgcaggttgaactggtccccgagcgcctgcgcggcgaaaccctggacttc
gacctggccgatggcgataccgtcatcgtcgaggctggccgccgcatcaccgcgcgccac
atccgccagctggagcagtccggcatcgaggcgctggccgtgccggacgactacctgctg
ggccggaccctgtcgcacgacgtgcccgacaccgagaccggcgagctgctggccgcggcc
aacgatgagatcaccgaggagcacctggcggcgttccgcaaggccggcgtgaccaccatc
ggcacgatctggaccaacgacctggaccgcgggccgtacatctccaacaccctgcgcatc
gaccccaccaagacccagctcgaggcgctggtggagatctaccggatgatgcgcccgggc
gagccgccgaccaaggacgccgcccagaacctgttccacaacctgttcttcaccttcgag
cgctacgacctgtcggccgtgggccggatgaagttcaaccgccgcctgggccgcaaggag
accgaaggcgcgccggtgctctacgacgcgcgctacttcgcggagcgcaaggacgacgag
tcggtcaagctgcgtgaggaatacggcgacagctcggacatcctcgacgtgatcaaggtg
ctgaccgagatccgcaacgggcgcggcgtggtcgatgacatcgaccacctgggcaaccgc
cgcgtgcgctcggtgggcgagatggccgagaacaccttccgcgtgggcctggtgcgcgtg
gagcgcgccgtgcgcgagcgcctgaccatggctgaggccgatggcctgaccccgcaggag
ctgatcaacgccaagccggtggcggccgcggtgaaggagttcttcggctcctcgcagctg
tcgcagttcatggaccagaacaacccgctgtcggaggtcacccacaagcgccgcgtgtcg
gccctggggccgggcggcctgacccgcgagcgcgcgggcttcgaggtgcgcgacgtgcac
ccgacccactacggccgggtgtgcaccatcgagaccccggaaggcccgaacatcggcctg
atcaactcgctggcggtgttcgcccgcaccaaccgctacggcttcctggagaccccgtac
cgcaaggtcgtggacggcaaggtcaccgacgagatcgagtacctgtcggcgatcgaggag
aacgactacgtcatcgcccaggcgaacgcgccgctcgacgacgagggccgcctgaccgag
cagttcgtggacgtgcgctaccagggcgagaacatgctcaagccgccggcggaggtccac
ttcatggacgtctcgccgatgcagaccgtgtcggtcgcggccgcgctggtcccgttcctt
gagcatgacgacgccaaccgcgcgctgatgggcgccaacatgcagcgccaggcggtgccg
accctgcgcgccgagaagccgctggtgggcaccggcatcgagcgcgccgtggcccgcgac
tccggcgtgaccgtgaacgcccgccgcggcggcgtggtcgagcaggtggacgccggccgc
atcgtggtcaaggccaacgaggacgagctctccggcgagcaggatgccggcgtcgacatc
tacagcctggtcaagtacacccgctccaaccagaacacctgcatcaaccagcgtccgctg
gtgcacgtgggcgacgtggtggagcgcggcgacgtgctggccgacggtccgtcgaccgac
atcggcgagctggccctgggccagaacatgctggtcgcgttcatgccctggaacggctac
aacttcgaggactcgatcctgctctccgagcgggtcgtgaccgaggaccgctacaccacg
atccacatcgaggagctcaccgcggtcgcgcgtgacaccaagctgggcccggaggagatc
tcctccgacatccccaacgtctccgagcaggcgctcaaccgcctggacgaatcgggcgtg
gtgtacatcggcgccgaggtgcgcgccggcgacatcctggtcggcaaggtcacgcccaag
ggcgagagccagctgaccccggaagagaagctgctccgggcgattttcggcgagaaggca
tccgacgttaaggacagctcgctgcgcgtgccgccgggcatggacggcaccgtcatcgac
gtgcaggtgttcacccgcgacggcatcgagaaggacaagcgcgcgcgccagatcgaggaa
tcggagatcaagcgcgtcaagaaggacttcgacgaccagttccggatcctggaggcggcg
atctacgcgcgcctgcgcagccagctgatcggcaagaccgccaacggcggcgccggcctg
aagaagggcgagaccgtcaccagtctggtgctcgacggcctgaagaagtccgactggttc
aacatccgcatgaaggacgccgaggccgtggaggccatcgagcgcgcccagatgcagatc
gagacccaccgcaaggagttcgacaagcggttcgaggacaagcgcgccaagatcacccag
ggcgacgacctggccccgggcgtgctgaagatggtgaaggtgttcctggcggtgaagcgc
cgcatccagccgggtgacaagatggccggccgccacggcaacaagggcgtggtgtcggcg
atcgtgccggtgcaggacatgccctacatggccgacggcgagaccgtggacatcgtgctc
aacccgctgggcgtgccgagccgcatgaacatcgggcagatcctggaaacccacctgggc
tgggccgccaagggcctgggccgcaagatccagggcatgctcgaggcgcaggccaagatc
aacgacctgcgcaagttcctggaccagatctacaaccacgacagcgacatcaccgcccag
caggtggacctggaccagttcagcgacgaggaattgctgaccctggcccgcaacctgacc
ggcggcgtgccgatggccaccccggtgttcgacggcgcggccgagtccgagatcaagaag
atgctcgagctcgccgacctgccgaccagcggccagacccgcctgttcgacggccgcacc
ggcgagcagttcgagcgcgaggtcacggtgggctacatgcacatgctcaagctcaaccac
ctggtggacgacaagatgcacgcgcgttcgaccggcccgtactcgctcgtcacccagcag
ccgctgggcggcaaggcgcagttcggcggccagcgcttcggcgagatggaagtctgggcg
ctggaagcctacggcgcggcctacaccctgcaggaaatgctgacggtgaagtccgacgac
gtgcagggccgcaaccagatgtacaagaacatcgtcgacggcgaacacgagatggttgcc
ggcatgccggagtcgttcaacgtgctggtcaaggagatccgctcgctggccatcaacatg
gagctggaggaggactga |
|---|
