Luteimonas sp. JM171: BGP89_01455
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Entry
BGP89_01455 CDS
T10109
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
luj Luteimonas sp. JM171
Pathway
luj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
luj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGP89_01455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
luj03019
]
BGP89_01455
03400 DNA repair and recombination proteins [BR:
luj03400
]
BGP89_01455
Enzymes [BR:
luj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BGP89_01455
Messenger RNA biogenesis [BR:
luj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BGP89_01455
DNA repair and recombination proteins [BR:
luj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BGP89_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOH35188
LinkDB
All DBs
Position
298687..300522
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AA seq
611 aa
AA seq
DB search
MSVPQHPRALEILQRVFGHSAFRGEQAAIVDHLASGNDALVLMPTGGGKSLCYQLPALLR
EGTAVVVSPLIALMQDQVEALLQLGVRAAYLNSTLEAAEAQAIERKLLAGELDLLYVAPE
RLLTPRFLSLLDRAHIALFAIDEAHCVSQWGHDFRPEYRELTILHERWPQVPRIALTATA
DPPTQREIAERLQLEQARRFVSSFDRANIRYTVVQKDSAKRQLLDFLGGREGQAGIVYCL
SRRKVEEFADFLVANGFDAVPYHAGMAAAERAANQRRFLLEEGVVVVATIAFGMGIDKPD
VRFVAHMDLPKSIEGYYQETGRAGRDGEPADAWMCYGLGDLVLLRQMIEQSESGEERKRL
EHRKLDALVGYCESMRCRREVLLANFGETYRPANATGCGNCDNCLHPPEAWDATVAAQKA
LSCVYRSGQRFGAAHVIDILRGADNEKIRQFGHDQLSTYGIGADTDARSWRGVFRQLVAH
GLLEVDAEGYGGLRLTAASRPVLRGEQQLLLRKVAPPRRERERSRAARASAPELELAPDD
MPLFEALRQMRARLAREQGVPAYVIFHDSTLREIAARRPGNADELAGIGGIGTGKLARYG
DVVLETVMDTP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcccccagcatccccgcgcgctggagatcctgcagcgcgtgttcggccactcc
gcgttccgcggcgagcaggccgccatcgtcgaccatctggcctccggcaacgacgccctc
gtgctgatgcccaccggcggcggcaagtcgctgtgctaccagttgccggcgctgctgcgc
gagggcaccgcggtggtggtgtcgccgctgatcgcgctgatgcaggaccaggtggaggcg
ctgctgcagctgggcgtgcgcgccgcctacctcaattccacgctcgaggcggccgaagcc
caggccatcgagcgcaagctgctggcgggggagctggacctgctgtacgtggcccccgag
cggctgctgaccccccggttcctgtcgctgctggaccgggcccacattgcgctgttcgct
atcgacgaggcgcactgcgtatcgcagtggggccacgacttccgccccgaataccgcgaa
ctgacgatcctgcacgagcgctggccgcaggtgccgcggatcgcgctcaccgccaccgcc
gacccgcccacccagcgcgagatcgccgagcgcctgcagctggagcaggcccgccgcttc
gtcagttcgttcgaccgcgccaacatccgctacaccgtggtgcagaaggacagcgccaag
cgccagctgctggatttcctgggcgggcgcgagggccaggcggggatcgtgtactgcctg
tcccggcgcaaggtggaggaattcgccgacttcctggtggccaacgggttcgacgccgtg
ccataccacgccggcatggccgcggccgagcgcgcggccaaccagcggcgcttcctgctg
gaggaaggcgtggtggtggtggcgacgatcgccttcggcatgggcatcgacaagcccgac
gtccggttcgtggcgcacatggacctgcccaagtcgatcgaagggtattaccaggaaacc
ggccgcgccggccgcgacggcgagcccgccgatgcatggatgtgctacggcctgggcgat
ctggtgctgctgcggcagatgatcgagcagtccgagtcgggcgaggagcgcaagcggctg
gagcatcgcaaactcgacgccctggtcggttattgcgaatcgatgcgctgccgccgcgag
gtgctgctggccaatttcggcgaaacctaccggccggcgaacgccacgggctgcggcaac
tgcgacaactgcctgcacccgcccgaagcatgggacgccaccgttgcggcgcagaaggcg
ctcagctgcgtttaccgcagcggccagcgctttggtgccgcccatgtgatcgacatcctg
cgcggcgctgacaacgagaagatccgccagttcggtcacgaccagctgagcacatatggc
atcggcgcggacaccgacgcccgcagctggcgcggcgtattccggcagctggtggcccac
ggcctgctggaggtggacgccgaaggctacggcggcctgcgcctgaccgcagcaagccgg
ccggtgttgcgcggggaacagcagctgctgttgcgcaaggtggcgcccccgcgccgcgag
cgtgagcgctcccgggctgcccgggccagcgcaccggagctcgaactggcgcctgacgac
atgccgctgttcgaagccctgcgccagatgcgcgcgcggctggcgcgcgagcagggcgtg
ccggcgtacgtgatcttccacgacagcaccctgcgcgagatcgccgcgcgccggccgggc
aatgccgatgaactcgccggcatcggcggcatcggcaccggcaagctggcgcgctacggc
gacgtggtgctcgaaacggtgatggacaccccatga
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