Luteimonas sp. JM171: BGP89_04895
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Entry
BGP89_04895 CDS
T10109
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
luj Luteimonas sp. JM171
Pathway
luj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
luj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BGP89_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
luj03400
]
BGP89_04895
Enzymes [BR:
luj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BGP89_04895
DNA repair and recombination proteins [BR:
luj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BGP89_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
AAA_11
DUF87
Motif
Other DBs
NCBI-ProteinID:
AOH35774
UniProt:
A0A1B3W6T9
LinkDB
All DBs
Position
1086704..1090330
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AA seq
1208 aa
AA seq
DB search
MSSTDPYLSQELKGVWAIEASAGTGKTFTLATLLARLVLEEDLGVGEILAVTFTEAATQE
LRARVRQRLVLAADVAAEAPLGDSPEATLMQALIDQHLAKGKESRDALRRRLRRAADDID
MAAIFTIHGFCARVLREHALESGQGFDPPELLPSDADLRAAIAADLWRAHAVDADTVDDL
HALWPQGPDALAADLSPLVREDRLLPAPPDDLPDPGPMLRAAAEQFAEAARTHGDGFRDD
LLRAASGGVLNKGSYKAEWINELFAQLRTWCSGNTRRPFRHGKFANLQRDTLAKRTLKGQ
QANTPDSPLCDAVADYAAALAEADRMQEDRKTALLHRLREDARRRLERHKRQARVLTFDD
QIDRVANALDGEHGDALVERLRGQYRIALVDEFQDTDPRQWKIFNRVFGANSDEPALFLI
GDPKQAIYGFRGGDVETYLAARQTAQEAPSLAHNFRSRPSVLQSIGALYAQAQDAHAADP
DKIAPPFIDDRIAFYPVQPGGTRADDEYQRGGKPAPALTLWRAPEPTETDRQGNPKPYTA
GQSRELATRACVAAIHRVLTEARAGTATIKGEPVRPGDIAVLVRTHREAMQIRDALAAVG
IPAVAAGKQSLFATSEARELHTLLQALVHGADDRRLRAALATVLVGEDAHAIAALDAEGD
VLQQKQLEALAWRERLQRGGPLALVGELCSQHAPRLLGLMDGERRLTNYLQLAEHLQEAQ
RTALGLHGLLDWLARAIAEANDNDEAQLLRLESDARRVQIVTLHKSKGLEYPLVFLPYVG
IGGKPRHHGGRVVVHGDNGRELHWKLQEETSGWAEACEAWRRSQRAEDARLLYVGLTRTR
DALWLATGHFYAGAQSPLSQMVSNPEQLAARVPDAIAIDDAVPPRDLPWLGAELAEEVPP
ARTARRPLASDWWVYSFTQLARAEAGHDTSSAATQPAPGGRDEPHVDPDAAPIELTDTDR
KFSGARFGVVLHEVFENADFAAWQGWRPGKDAPEGERKKITDALGKGGYPAGDMEEGIAV
ITPMIGHTLTATLPEGTALAAVPEDHRRAEIEFQFSLAPTRVDALLALLHRHGLLTSRQG
FGARRRLEGLMTGLIDLTYLHDGRWHVLDYKSNRLPGYGPAELEEAMAHSEYGLQALIYT
LALHRWLRFRLGDGYDYARDFGGARYVFCRGVDATGSEGQGIHAWRFEPELVHALDKLFA
GDAQEAAA
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaccgatccctacctgagccaggagctgaagggcgtttgggccatcgaggcc
tccgccggcaccggcaagaccttcaccctggccaccctgctggcgcggctggtgcttgag
gaagacctgggcgtgggcgagatcctcgccgtcaccttcaccgaggccgccacccaggag
ctgcgcgcgcgggtgcgccagcggctggtgctggcagcggacgtggcggcggaagcgccg
cttggtgactccccggaagccacgctgatgcaggcgctgatcgaccagcaccttgcgaag
ggcaaggaatcccgcgacgccctgcgccgccgcctgcgccgtgccgccgacgacatcgac
atggcggccatcttcaccatccacggcttctgcgcgcgcgtgctgcgcgagcatgcgctg
gaaagcgggcagggcttcgacccgccggagctgttgcccagcgacgccgacctgcgcgcc
gccatcgccgctgacctgtggcgcgcccacgccgtggatgccgataccgtcgacgacctg
cacgcgctgtggccgcagggccccgacgcgctcgcggccgacctctccccgctggtgcgc
gaagaccggctgctgccggcgccacccgacgacctgcccgatcccggcccgatgctccgc
gccgccgcggaacaattcgccgaagccgcccgcacccacggcgacggcttccgcgacgac
ctgctgcgcgccgccagcggcggggtgctcaacaagggcagctacaaggccgagtggatc
aacgagctgttcgcccagctcaggacctggtgcagcggcaacacccggcgcccgttccgc
cacggcaagttcgccaacctgcagcgcgatacgctcgccaagcgcaccctcaagggacag
caggccaacaccccggattcgcccctgtgcgacgccgtggccgactacgccgccgcgctg
gccgaagccgaccgcatgcaggaagaccgcaagacggccctgctgcaccgcctgcgcgaa
gacgcgcgccgccgcctggagcgccacaaacgccaggcccgcgtgctcaccttcgatgac
cagatcgaccgcgtggccaatgcgctggatggcgaacacggcgacgccctggtcgagcgc
ctgcgcgggcagtaccgcatcgccctggtggacgagttccaggacaccgacccgcgccag
tggaagatcttcaaccgcgtgttcggcgccaacagcgacgagcccgcgctgtttttgatc
ggcgaccccaagcaggccatctacggcttccgcggcggcgacgtggagacctacctggcc
gccaggcagacggcgcaggaggctccgtcgctggcgcacaacttccgctcgcgcccgtcc
gtgctgcaaagcatcggggcgctctacgcccaggcgcaggatgcgcacgccgccgatccg
gacaagatcgccccgcccttcatcgacgatcgcatcgccttctacccggtgcagccgggc
ggcacgcgcgccgacgacgagtaccagcgcggtggcaaacccgcccccgcgctcaccctg
tggcgcgccccggagccgaccgaaaccgaccgccagggcaaccccaagccctacaccgcc
gggcaatcgcgcgagctggccacccgcgcctgcgtggccgccatccaccgcgtgctcacc
gaggcccgcgccggcaccgccaccatcaagggcgagccggtgcgccccggcgacatcgcc
gtgctggtgcgcacccatcgcgaggcgatgcagatccgcgatgcgctggccgccgtcggc
attcccgccgtggccgccggcaagcagagcctgtttgccaccagcgaggcgcgcgagctg
cacaccctcttgcaggcgctggtgcacggcgccgacgaccgccgcctgcgcgccgcgctt
gccaccgtgctggtgggcgaggacgcccacgccatcgccgcgctggatgccgagggcgac
gtgctgcagcagaagcagctcgaggccctggcctggcgcgagcgcctgcagcgcggcggc
ccgctggcgctggtgggcgagctgtgttcgcagcacgccccgcgcctgctcggcctgatg
gacggcgagcgccgcctcaccaactacctgcagctggccgagcacctgcaggaagcccag
cgcaccgccctgggcctgcacggcctgctcgactggctggcccgcgccatcgccgaggcc
aacgacaacgacgaggcccagctgctgcgcctggagtccgacgcccgccgcgtgcagatc
gttaccctgcacaagagcaagggcctggagtacccgctggtgttcctgccctacgtgggc
atcggcggcaagccgcgccatcacggcgggcgcgtggtggtgcacggcgacaacggccgc
gagctgcactggaagctgcaggaagagaccagcggctgggcggaggcctgcgaagcctgg
cgccgcagccagcgcgccgaggacgcgcgcctgctttacgtcggcctcacccgcacccgc
gacgccctgtggctggccaccggccacttctacgccggcgcgcagtcgccgctgagccag
atggtgagcaacccggaacaactggccgcgcgcgtgcccgatgccatcgccatcgacgac
gccgtgccgcctcgtgacctgccctggctcggcgccgagctggcggaagaagtgcccccc
gcccgcaccgccaggcgcccgctcgccagcgactggtgggtctacagcttcacccagctt
gcccgcgccgaggccggccacgacacctccagcgccgccacccagcccgcccccggcggc
cgcgacgagccgcacgtggatccggatgccgcccccatcgaactcaccgacaccgaccgc
aagttcagtggcgcccgtttcggcgtggtgctgcacgaagtgttcgaaaacgccgacttc
gccgcctggcagggctggcgccccggcaaggacgccccggaaggcgaacgcaagaagatc
accgacgccctgggcaagggcggctatcccgccggggacatggaggaaggcatcgccgtc
atcacccccatgatcggccacaccctcaccgccacccttcccgaaggcaccgcgctggcc
gccgtgccggaagaccaccgccgcgcggagatcgagttccagttctcccttgcgcccacc
cgcgtcgatgcgctgctggccctgctgcaccgccacggcctgctcaccagccgccagggg
tttggcgcgcggcgcaggctggaaggcctgatgaccggcctgatcgacctcacctacctg
catgacggccgctggcacgtgctcgactacaaatccaaccgcctgcccggctacggcccg
gccgagctggaggaggccatggcgcacagcgagtacggcctgcaggcgctgatctacacc
ctggccctgcaccgctggctgcgcttccgcctgggcgatggctacgactacgcgcgcgac
ttcggcggcgcccgctacgtgttctgccgcggcgtggacgccaccggcagcgaagggcag
ggcatccacgcctggcgcttcgagcccgagctggtgcacgcactcgacaagctgtttgcc
ggcgatgcgcaggaggccgccgcatga
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