Luteimonas sp. JM171: BGP89_06210
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Entry
BGP89_06210 CDS
T10109
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
luj Luteimonas sp. JM171
Pathway
luj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
luj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGP89_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
luj03021
]
BGP89_06210
03019 Messenger RNA biogenesis [BR:
luj03019
]
BGP89_06210
Transcription machinery [BR:
luj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BGP89_06210
Messenger RNA biogenesis [BR:
luj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BGP89_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Fungal_virus_P2_C
S1CSD-TOTE-2
Mor
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
AOH36000
LinkDB
All DBs
Position
complement(1367500..1369251)
Genome browser
AA seq
583 aa
AA seq
DB search
MSDNTPETGDTAEPRVRKRATKKTARKAVKADAPAKQAESASEPAAETAQPAAPAEPAKK
HGDALAPADAGGGGAGRDDAGGAGGDAGQAQSGQGGEQKQPQQQQQQQRNEQHQRDGGGR
QGRRDRFRNRRDRGGRGRDDGLPQDGNDQGQRLPPPNVPEGFPQYSLSDLKGMPAHQLMD
IAEQLQIHEGVARARKQDVIFHLLKVLTRHGDGVVADGVLEILPDGFGFLRAAEASYLAG
PDDVYISPSQIRRFNLRTGDHLSGRIRWPKDGERYFALATIDTINEEPLEASKGKVLFEN
LTPLFPRERFKLERGDGSSEDIAGRILDLMAPQGKGQRSLIVSPPKAGKTIMMQQIASAI
TYNHPDVHLIVLLIDERPEEVTEMQRSVRGEVISSTFDEPAARHVQVAEMVIERAKRLVE
HKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTI
IATALVDTGSAMDKVIYEEFKGTGNSEIHLDRRITEKRVYPAINVNQSGTRREDLLIDPE
LLQKIWILRKLLHPMDEIAAMEFLLDKMKNTKSNDEFFASMRR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgacaatacccccgaaaccggcgacaccgccgagccccgcgtgcgcaagcgcgcc
accaagaagaccgcgcgcaaggcggtgaaggccgacgcgccggcgaagcaggcggaatcc
gcctccgaaccggcggccgagaccgcccagccggcggcacccgcagagccggcgaagaag
cacggcgacgccctcgccccggccgatgccggcggcggtggcgccggccgtgacgacgcc
ggcggcgctggcggggacgcaggccaggcccagtccggccagggcggcgagcagaagcag
ccgcagcaacaacagcaacagcagcgcaacgagcagcaccagcgcgacggcgggggccgc
cagggccgccgcgaccgcttccgcaaccgccgcgaccgcggcggccgcggccgcgacgac
ggcctgccccaggacggcaacgaccagggccagcgcctgccgccgcccaacgtccccgag
ggcttcccgcagtactcgctgagcgacctgaagggcatgccggcgcaccagctgatggac
atcgccgagcagctgcagatccacgagggcgtggcccgcgcccgcaagcaggacgtgatc
ttccacctgctcaaggtgctcacccgccacggcgacggcgtggtggccgacggcgtgctg
gagatcctgcccgacggcttcggcttcctgcgcgcggccgaggcgtcctatctcgccggc
cccgacgacgtctacatcagccccagccagatccgccgcttcaacctgcgcaccggcgac
cacctctccggccggatccgctggccgaaggacggcgagcgctacttcgccctggccacc
atcgacaccatcaacgaggagccgctggaggccagcaagggcaaggtgctgttcgagaac
ctgaccccgctgttcccgcgcgagcgcttcaagcttgagcgcggcgacggctccagcgag
gacatcgccggccgcatcctcgacctgatggcaccgcagggcaagggccagcgctcgctg
atcgtctcgccgcccaaggccggcaagacgatcatgatgcagcagatcgccagcgcgatt
acctacaaccacccggacgtgcacctgatcgtgctgctgatcgacgagcggcccgaggag
gtcaccgagatgcagcgcagcgtgcgcggcgaggtgatcagctccaccttcgacgagccg
gccgcgcgccatgtgcaggtcgccgaaatggtgatcgagcgggccaagcgcctggtcgag
cacaagaaggatgtcgtgatcctgctcgactccatcacccgcctggcccgcgcctacaac
aacgtggtgcccagctcgggcaaggtgctcaccggcggcgtcgacgccaacgccctgcac
cggcccaagcgcttcttcggcgccgcgcgcaacgtggaggaaggcggatcgctgaccatc
atcgccacggcgctggtggataccggctcggcgatggacaaggtgatctacgaggaattc
aagggcaccggcaactccgagatccacctggaccgccgcatcaccgagaagcgcgtgtac
ccggcgatcaacgtcaaccagtccggcacccgccgcgaggacctgctgatcgatccggag
ctgctgcagaagatctggatcctgcgcaagctgctgcacccgatggacgagatcgcggcc
atggagttcctgctcgacaagatgaagaacaccaagtccaacgacgagttcttcgcctcg
atgcgccgctga
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