Luteimonas sp. JM171: BGP89_11460
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Entry
BGP89_11460 CDS
T10109
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
luj Luteimonas sp. JM171
Pathway
luj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
luj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGP89_11460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
luj03019
]
BGP89_11460
03016 Transfer RNA biogenesis [BR:
luj03016
]
BGP89_11460
Enzymes [BR:
luj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BGP89_11460
Messenger RNA biogenesis [BR:
luj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BGP89_11460
Transfer RNA biogenesis [BR:
luj03016
]
Prokaryotic type
tRNA degradation factors
BGP89_11460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
S1_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AOH36895
LinkDB
All DBs
Position
2457739..2459844
Genome browser
AA seq
701 aa
AA seq
DB search
MSKVTKSFQYGNRTVTLETGEIARQAGGAVVVKCEGTVLLVTAVANKTAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPDGFRNEVQVIATVMSLN
PEVDGDIPALIGASAAVALTGAPFAGPIGAAKVGYKDGQYLLNPTTTELEDSDLELVVAG
TKDAVLMVESEANELSEEVMLGAVMFGHQQMQVAIDTINELVAEAGKPKWEWEAPAPSEG
LVDTLRNAIGQGLNEAFKISDKLVRRDTISNLRKQILETLAPEAEEKSWTEGELAKQFGE
HEYQTMRRSVLETKVRIDGRAPDEVRPITSKVGILPRVHGSALFTRGETQAIVVTTLGTA
RDGQIIDAVGGEYKEHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
DFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAPVAGIAMGLVKEGDDYVVLS
DILGDEDHLGDMDFKVAGTENGVTALQMDIKIEGITEDIMKVALDQAKRGRLHILGEMAS
ALTAPRQELSEYAPRLLTIKIHPDKIREVIGKGGATIQGITKETGTQIDIQDDGTIVIAS
VNAAAAQAAKDRIEQITSDVEPGRVYEGKVVKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVSDKLTEGDVVMVKVLEVDKQGRIRLSMKAVEEGEGAEG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaagttaccaagagcttccagtatggcaatcgtacggtcaccctggagaccggc
gagatcgcccgccaggcaggcggcgcggtcgtggtcaagtgcgagggcaccgtgctgctc
gtgaccgccgtggccaacaagactgcgcgtgaagggcaggatttcttcccgctgaccgtc
gattaccaggagaagttctacgcaggcgggcgcatccccggcggtttcttcaagcgcgaa
ggccgcgccaccgagaaggaaaccctgatttcccgcctgatcgaccgcccgatccgtccg
ctgttccccgacggtttccgcaacgaggtgcaggtcatcgccacggtgatgtcgctgaac
ccggaagtggacggtgacatcccggcgctgatcggcgcttctgccgccgtcgccctcacg
ggcgcgcccttcgccggcccgatcggcgcggccaaggttggctacaaggacggccagtac
ctgctcaacccgaccactaccgagctcgaggattcggaccttgaactggtcgtggcgggc
acgaaggacgccgtgctgatggtggaatcggaggccaatgagctgtccgaggaagtgatg
ctgggcgcggtgatgttcggccaccagcagatgcaggtggccatcgataccatcaacgag
ctggttgccgaagcgggcaagccgaagtgggagtgggaagccccggcgccgagcgaaggc
ctggtggacaccctgcgcaacgccatcggccagggcctgaacgaggccttcaagatcagt
gacaagctggtccgccgcgacaccatctcgaacctgcgcaagcagatcctcgagaccctg
gccccggaggccgaggaaaagtcctggaccgagggcgagctggccaagcagtttggcgag
cacgagtaccagaccatgcgccgctcggtgctggagaccaaggtgcgcatcgacggccgc
gcgccggacgaagtgcgcccgatcacctccaaggtgggcatcctgccgcgcgtgcacgga
tcggccctgttcacccgcggcgagacccaggcgatcgtggtcaccaccctgggcaccgcc
cgcgacggccagatcatcgacgccgttggcggcgagtacaaggaacacttcctgttccac
tacaacttcccgccttactcggtgggcgaggccggccgcatgatgggccccaagcgccgt
gaaatcggccacggccgcctggccaagcgcggcgtgctggccgtgatgccgaccatggaa
gacttcccgtacaccatccgcgtggtgtcggagatcaccgaatccaacggctcctcgtcg
atggcttcggtctgcggcgcctcgctggcgctgatggatgcgggcgtgccgatcaaggcg
ccagtggcgggtatcgccatgggcctggtgaaggaaggcgacgactacgtcgtgctctcc
gacatcctcggcgacgaggaccacctgggcgacatggacttcaaggtggccggtaccgag
aacggcgtgaccgccctgcagatggacatcaagatcgagggcatcaccgaggacatcatg
aaggtggcgcttgaccaggccaagcgtggccggcttcacatcctgggcgagatggccagt
gcgctgaccgcgccgcgccaggaactgagcgagtacgccccgcgcctgctgaccatcaag
atccatccggacaagatccgcgaggtgatcggcaagggcggtgccaccatccagggcatc
accaaggagaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgcggctgccgcgcaggccgccaaggaccgcatcgagcagatcacctcggacgtg
gagccgggccgggtctacgagggcaaggtggtcaagatcatggactttggtgcgttcgtg
acgatcctgccgggcaaggatggcctggtacacgtctcgcagatctcctccgagcgcgtg
gagaaggtgtccgacaagctcaccgaaggtgacgtggtcatggtcaaggtgctggaagtc
gacaagcagggccggatccgcctgtcgatgaaggccgtggaagagggcgagggcgcggaa
ggctga
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