Luteimonas sp. JM171: BGP89_12580
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Entry
BGP89_12580 CDS
T10109
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
luj Luteimonas sp. JM171
Pathway
luj03410
Base excision repair
luj03430
Mismatch repair
luj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
luj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BGP89_12580
03430 Mismatch repair
BGP89_12580
03440 Homologous recombination
BGP89_12580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
luj03400
]
BGP89_12580
DNA repair and recombination proteins [BR:
luj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BGP89_12580
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BGP89_12580
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BGP89_12580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
YbjN
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AOH37080
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Position
complement(2699725..2701452)
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AA seq
575 aa
AA seq
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MTPVRRIRRRPPVPAGSGWPDHVPPLLRRIYAARGAADPALARPRLAGLPPPAGMRGIQL
AAELLADAIARNRRILVVADFDCDGATACAVAVRGLRMLGARSVVHAVPNRAVHGYGLSP
ALVQEVSALEPDLLLTVDHGIACHEGIRAARARGWQVVVTDHHLPGERLPEADAIVNPNQ
PGCGFGSKALAGVGVVFYVLLALRALLRRREAFHGPEPDLAELLDLVAVGTVADLVPLDA
CNRALVAAGLRRLRSGQGTPGLRALIEVAGRDARALSAADIGYAVAPRLNAAGRLEDMSL
GIECLLCDEPGRARELARTLDAINAERRSVQATMLGEAESALASHSVHVAGADARVAWCL
FDPAWHPGVVGLVASKLKERLHRPVVAFAPAAPGSGELRGSARSIPGFHIRDALAAIDAG
NPGLIRRFGGHAMAAGLTLDAERFGRFEEAFSAQAAATLDDALLQSVIDSDGELAPEEFD
RFHAEALRDGGPWGQAFPEPLFDGEFELLDFRQVGDRHLRMRLRAPGGGGALKAIHFGGW
GEEPPARMRLAFRLACDDWRDARDIQLVVEHREPA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggtgcgacgcatccgccgccgcccgccggtgcccgccggcagcggctggccc
gatcatgtcccgccgctgctgcgccggatctacgcggcgcggggcgcggccgatccggcc
ctggcccggccccggctggccgggctgcccccaccggccgggatgcgcggcatccagttg
gccgcggaactgctggcggatgcgatcgcccgcaaccggcggatcctggtggtggccgac
ttcgattgcgacggtgccacggcgtgtgcggtggccgtgcgcgggctgcggatgctcggg
gcgcgcagcgtggtgcacgccgtgccgaaccgggcggtgcacggctacgggctctcgccc
gcgcttgtgcaggaagtgtccgcgcttgagcccgacctgctgctcaccgtggaccatggc
atcgcctgccatgaagggatccgcgctgcccgcgcgcgcggctggcaggtggtggtcacc
gatcaccacctgcccggcgagcggctccccgaggcggatgccatcgtcaaccccaaccag
cctggctgcggcttcggcagcaaggcgctggccggcgtgggggtggtgttctacgtgctg
ctggcgctgcgcgcgctgctgcggcggcgcgaggcgttccacgggccggaaccggacctg
gccgagctgcttgacctcgtcgccgtgggcacggtggccgacctggtgccgctggacgcc
tgcaaccgcgcactggtggcggcgggcctgcggcggctgcgttcggggcagggcacgccc
gggttgcgggcgctgatcgaggtggcggggcgcgacgcccgtgcgctgtccgcggcggat
atcggctacgcggtggcgccgcgcctgaacgccgcgggccgccttgaagacatgagcctg
gggatcgaatgcctgctgtgcgacgagccgggccgggcgcgcgagctggcgcgcacgctc
gacgccatcaacgccgaacggcgctcggtccaggcgaccatgctcggcgaagcggagtcc
gcgctcgcgtcccacagcgtgcacgttgccggggccgacgcgcgggtcgcctggtgcctg
ttcgacccggcgtggcacccgggcgtcgtcgggctggtcgcctccaagctcaaggagcgc
ctgcatcggccggtggtcgcctttgccccggccgccccgggcagcggcgagctgcgggga
tccgcgcgctcgatcccgggtttccacatccgcgacgcgctggccgcgatcgatgccggc
aacccgggcctgatcaggcgcttcggcggccacgcgatggcggccggcctgaccctggat
gcggagcggttcggacgctttgaagaggcattctccgcccaggcggctgccaccctggac
gatgcgctcctgcaatcggtgatcgacagcgacggcgagctggctccggaagagttcgat
cgcttccatgccgaggcgctgcgcgacggcggcccctgggggcaggccttcccggagccg
ctgttcgacggggaattcgagctgctcgacttccgccaggtcggcgaccggcacctgcgc
atgcgcttgcgcgcgcccggtggcggcggcgcgctgaaggccatccatttcgggggctgg
ggcgaggagccgcctgcccgcatgcgcttggccttccgcctggcctgcgacgactggcgc
gacgcccgggatatccagctggtggtggagcaccgcgaaccggcctga
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