Luteimonas sp. JM171: BGP89_13780
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Entry
BGP89_13780 CDS
T10109
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
luj Luteimonas sp. JM171
Pathway
luj03030
DNA replication
luj03430
Mismatch repair
luj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
luj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BGP89_13780
03430 Mismatch repair
BGP89_13780
03440 Homologous recombination
BGP89_13780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
luj03032
]
BGP89_13780
03400 DNA repair and recombination proteins [BR:
luj03400
]
BGP89_13780
Enzymes [BR:
luj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BGP89_13780
DNA replication proteins [BR:
luj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BGP89_13780
DNA repair and recombination proteins [BR:
luj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BGP89_13780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AOH37286
LinkDB
All DBs
Position
2975911..2979438
Genome browser
AA seq
1175 aa
AA seq
DB search
MSARFVHLHLRSEYSLVDSTIRIPQLVDRCVALGQPAVAVTDRNNLFALVESHARAEAAG
VKPLAGADVMVASGSEPAWPVTLLCRNHNGYLTLSRLLSRAWLEGHRQDGVVVRPEWLLE
HSADLFALVGRHTEAGRLAAAGKHELALQWLGDWQRAFDDRLHLELTRTNRDGEAQFNDF
ALHAASERGIPVVASNDVRFLERQGFDAHEARVCIASGRVLDDPRRPRSYSAEQYLKSAE
EMAELFADVPDALDNTVALAQRCNFELSLGKYYLPAFPVPDDHTLDSWIRSESCRGLEER
LEKHPLAEGHTRESYFERLDTELDVIVKMGFPGYFLIVADFINWAKEQGIPVGPGRGSGA
GSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIEYVARKYGRDR
VSQIITYGTMAAKAVVRDVGRVLGYPYGMVDGIAKLVPMTLGVSLSDALGRTEKGRKDEN
WRSDELIARYNDEEDVRDLLDLALQLENLTRNAGKHAGGVVIAPRPLSDFCPLFAEHDEG
GRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINRRRKAGGEAPLDISALAL
DDKATYELFARGDTVAVFQFESRGMRELLKRAKPDTFEDIIALAALFRPGPLNSGMDKDW
VDRKHGNAEVTYPHPKLEPVLAPTYGVIVYQEQVMQIAQVLAGYSLGGADLLRRAMGKKK
PEEMAKERAKFEAGAAQNGVDPKVATSIFDLMEQFAEYGFNKSHSAAYALVAYQTAWLKT
HYPAEFMAAVLSSDMDNTDKVVGFLDEARALGLTVLPPDVNASSFMFEAIDPQTIRYGLG
AVKGVGRGACEAIASERANGGPYADLLDFCNRVDAGRMNRRTMEALTLSGALDGLGSNRA
SLMLQLPHAMKATEQLARERSAGQVSLFGGGDAAPALEIELPETAPWPLAQTLSGERETL
GHYLSGHPIDPYRQDLEALVGNDLGRLDALWASASGGESRGGWRQEAKVVIAGLVTAMRR
RGDSQAFVQLEDGRGRIECAFFSEAFQEYAPLLTRDRILIVEGGLREDEFSGGFSLRARR
CWDFQQVCPDLARGMRLRLDLRDRGLLERVEQMLEERRPGSTPLRYELLLASGARGALDL
NGQSSVRVDAELPGLLRADPGVREVELQLERPWTS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcccgctttgtacacctccacctgcgcagcgagtattcgctggttgattcgacg
atccgcatcccgcagctcgtcgatcgctgcgttgcgctgggccagccggcggtggcggtc
accgaccgcaacaacctgttcgcgctggtggagtcccatgcccgggccgaagcggccggg
gtgaagccgctggcaggcgccgacgtcatggtggccagcggcagcgaaccggcctggccg
gtgaccctgctgtgccgcaaccacaatggctacctcaccctctcgcgcctgctcagccgc
gcgtggctggaagggcaccgccaggatggcgtggtggtgcgcccggaatggctgctggag
cacagcgccgacctgttcgcgctggtgggacggcataccgaagccggacggctggcggcc
gccggcaagcacgagctggcgctgcaatggctgggtgactggcagcgcgcattcgatgac
cgcctgcacctggagctgacccgcaccaaccgcgacggcgaagcgcagttcaacgacttc
gcgctgcatgccgccagcgaacgcgggatcccggtggtggccagcaacgacgtgcggttc
ctggaacggcagggcttcgacgcgcacgaggcgcgggtgtgcattgccagcggccgggtg
ctggatgacccgcgacggccgcgcagctacagcgccgagcagtacctcaagtccgccgag
gagatggccgagctgttcgcggatgtccccgacgccctcgataacaccgtggccctggcc
cagcgctgcaacttcgagctgagcctgggcaagtactacctgccggccttcccggtcccg
gacgaccacaccctggacagctggatccgcagcgagtcgtgccgcggcctggaagagcgg
cttgagaagcaccccctggcggaaggacacacccgcgagagctatttcgagcgcctggac
accgagctggacgtcatcgtcaagatggggttcccgggctacttcctgatcgtcgcggac
ttcatcaactgggccaaggaacagggcatcccggtgggcccggggcgcggctcgggcgcc
ggctcgctggtggcctgggcgctgggcatcaccgatctggacccgctgccctacgacctg
ctgttcgagcgcttcctcaaccccgagcgggtgtcgatgccggacttcgacatcgacttc
tgcatggaccggcgcgacgaggtgatcgaatacgtcgcccgcaagtacgggcgcgaccgg
gtcagccagatcatcacctacggcaccatggccgccaaggcggtggtgcgcgacgtcggc
cgggtgctgggctacccgtacgggatggtggacggcatcgccaagctggtgccgatgacc
ctcggggtgtcgctgtcggatgcgctgggccgcaccgagaagggccgcaaggacgagaac
tggcgttcggacgagctgatcgcgcgctacaacgacgaggaggacgtgcgcgacctgctc
gacctggcgctgcagctcgagaacctgacccgcaacgccggcaagcacgccggcggcgtg
gtgatcgcgccgcgcccgctgagcgacttctgcccgctgttcgccgaacacgacgaaggc
gggcgcggcaagaacccggtcacccagttcgacaaggacgacgtggaagcggtgggcctg
gtgaagttcgacttcctcggcctgcgcacgctgaccatcatcgactgggcggtgaaggcc
atcaacaggcgccgcaaggccgggggcgaggcgccgctggacatctccgcgctcgccctg
gatgacaaggccacctacgaactgttcgcccgcggcgacacggtggcggtgttccagttc
gagtcgcgcggcatgcgcgagctgctcaagcgcgcgaaaccggacacgttcgaggacatc
atcgccctggcggcgctgttccggcccggccccctcaactcggggatggacaaggactgg
gtggaccgcaagcacggcaacgccgaggtcacctacccgcacccgaagctggagccggtg
ctggcgcccacctacggcgtgattgtctaccaggaacaggtgatgcagatcgcccaggtc
ctggccggctattcgctgggcggcgccgacctgctgcgccgggcaatgggcaagaagaag
cccgaggagatggccaaggagcgggccaagttcgaggccggcgccgcgcagaacggggtc
gatccgaaggtcgccacctcgatcttcgacctgatggaacagttcgccgagtacggcttc
aacaagtcgcactcggccgcctacgcgctggtggcctaccagaccgcatggctgaagacg
cactacccggccgaattcatggccgcggtgctgtcgtcggacatggacaacaccgacaag
gtggtgggtttcctggacgaggcgcgggcgctggggctgaccgtgctgccgccggacgtg
aacgcttcgagcttcatgttcgaggcgatcgacccgcagaccatccgctacggcctgggc
gcggtgaagggcgtgggccgcggcgcctgcgaggccatcgcctccgagcgcgccaacggc
gggccctatgcggacctgctggacttctgcaaccgggtcgacgcgggtcgcatgaaccgc
cggaccatggaagcgctgaccctctcgggcgcgcttgacggcctgggcagcaaccgcgcc
tcgctcatgctgcagctcccgcacgcgatgaaggcgaccgaacagctggcgcgcgagcgc
agcgccgggcaggtgtccctgttcggcggcggcgacgcggccccggcgctggagatcgag
ctgccggagaccgcgccgtggccgctggcgcagacgctctcgggcgaacgcgaaaccctg
gggcattacctcagcggccatcccatcgatccgtaccgccaggacctggaagcgctggtg
gggaatgacctggggcggctggatgcgctgtgggcttcggcatcgggcggcgagtcgcgc
ggcggctggcggcaggaagccaaggtggtgatcgcgggcctggtgacggcaatgcgccgc
cgcggcgactcccaggccttcgtgcagctggaggatggccgcggccgcatcgaatgcgcc
ttcttctcggaggccttccaggaatacgcgccgctcctcacccgcgaccggatcctgatc
gtcgagggcgggctgcgcgaggacgagttcagcgggggcttctccctgcgtgcccgccgc
tgctgggatttccagcaggtctgcccggacctggcgcgcgggatgcggctgcggctggac
ctgcgcgatcgcggcctgctggagcgggtggagcagatgctcgaagagcgccgtccgggc
agcacccccttgcgctacgaactgctgctggcctccggcgcccgcggcgcgctcgacctc
aacggccagtccagcgtgcgcgtggacgccgagctgcccgggctgctgcgcgccgacccg
ggcgtgcgcgaggtggaacttcagctcgagcgtccctggaccagctga
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