Urechidicola croceus: LPB138_07500
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Entry
LPB138_07500 CDS
T04497
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lul
Urechidicola croceus
Pathway
lul03030
DNA replication
lul03430
Mismatch repair
lul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB138_07500
03430 Mismatch repair
LPB138_07500
03440 Homologous recombination
LPB138_07500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lul03032
]
LPB138_07500
03400 DNA repair and recombination proteins [BR:
lul03400
]
LPB138_07500
Enzymes [BR:
lul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB138_07500
DNA replication proteins [BR:
lul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB138_07500
DNA repair and recombination proteins [BR:
lul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB138_07500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
T6SS_Tsi2-like
GLUCM-like_C
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
AOW20530
UniProt:
A0A1D8P7I6
LinkDB
All DBs
Position
1635607..1639971
Genome browser
AA seq
1454 aa
AA seq
DB search
MYLIFDTETTGLPKKWNAPITDTDNWPRCIQIAWQLHDELGQLIENQDYLVQTDGFNIPY
DAEQIHGISTQLADEKGISLIEVLEKFNVALSKTKFVVGQNVGFDLNIMGCEYHRLGIET
PLNSMPILDTCTETTANLCQIPGGRGGKFKLPTLTELHQHLFRKAFGEAHNATADVEATT
RCFLELIRKRVFTSEELDVTSDYFENFSAKNPQEIQLIGLKHINLKKASQKLRDKVDDKS
EDQTIQISSEDKTAFTNAKFAHLHTHSQFSILQSTASISDIVKATIKHNMPAVALTDGGN
MMGAFYFVKEILAHNKSVEEFNAKIGDGQVKKEIITPIVGSQFNVCVDHLDKSHKDNGYQ
IVMLAKNKKGYHNLAKMSSISHTKGFYYVPRIDKKVVEQYKEDIIILSGNIYGEIASKIL
NIGENQAEEALLWWKEKFKEDFYLEINNHHQENEKHVNEILLNFSKKHDVKLIATNDTFY
IDKNDADAHDILLCVKDGEKFDTPKGRGRGFRYGLDNEEYYFKSQDEMKSLFKDIPEAII
NIQEIVDKIEPYPLARDVLLPKFDIPEQFIKPEDEIDGGVRGENAYLRYLTYEGAKKRYG
EELDEDTIERLDFELSIIEKTGYPGYFLIVWDLIAEARKMDVSVGPGRGSAAGSVVAYCL
WITNIDPIKYDLLFERFLNPDRVSLPDIDIDFDDEGRQRVIDFVIDKYGSNNVAQIITYG
TMAAKSSIRDTARVLDLPLPDADRIAKLIPNTKLNYIFGTDTKSKSKIAELRSEDKENVA
ELQKISEGHDLAAETIKKALALEGSVRNTGTHACGVIITPEDITNLIPVSTAKDSDMFVT
QFDNNVVESAGLLKMDFLGLKTLSLIKDTVKIVKAKHGIDLIPDDFPLDDEKTYELFQRG
ETIGIFQYESPGMQKHMKNLKPTVFADLIAMNALYRPGPMEYIPSFIARKHGTEDITYDL
PEMEEFLKETYGITVYQEQVMLLSQKLADFTKGQADMLRKAMGKKIFALLEKLKPLFMEG
GTKNGHPEETLEKIWKDWEAFAAYAFNKSHSTCYAYIAYQTAYLKAHYPAEYMAAVLSNN
MRDIKQITFFMEECKRAGIKVLGPDVNESYYKFAVNNEGAIRFGMGAIKGVGESAVETIV
NERKENGSFKSIFDVAKRIDLRAANKRTFEGMVFAGGFDSFTETHRAQYFALDEKGQTFL
EKAIRYGAKFQENANSSQVSLFGETSEIQLPEPIIPDCEDWGMMEKLSKEKEVVGIYISG
HPLDDFKNEINCFCNASLIDFQDTKAIMNKDLSIAGIITSVEHRVSKNGKGWATFIIEDY
TAAHEFRMFSEEYLRHKHFLVPNSFLYVKIAARKNYYNDDVRLQFTDIQLLQEILGKLSK
KLTIQLDIRELNNSKIATLDSIFTNNKGDKSLHFTVYDTDEKVKLNLPSRSNKVAISNEL
LSLLDKQSLSYKLN
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatactgaaactactggtttacctaaaaaatggaacgccccaatt
acagatactgataattggccgcggtgtatccaaattgcatggcaactacatgacgaacta
ggtcaacttattgaaaatcaagactacttagtacaaacagatgggttcaatattccttat
gatgctgagcaaatccatggaatctcaactcaattggcagatgaaaaaggaatttcttta
atagaggttttagaaaaatttaacgtagcattatcaaaaacgaaatttgtagttgggcaa
aatgttggtttcgatttaaatataatgggatgtgaataccatagattaggtattgaaacg
ccattaaattcaatgcctattttagatacctgtacagaaactactgctaacttatgtcaa
atcccaggtggtagaggtggaaaattcaaactacctacacttacagagttacatcaacat
ttatttagaaaagcctttggagaggctcacaatgccactgccgatgttgaagcaacaact
agatgttttttagagttaattcgcaaaagagtttttacttctgaagagttagatgttaca
tcagattattttgagaatttttctgcaaaaaacccacaagaaatccaacttattggatta
aagcatatcaacttaaaaaaagcaagtcaaaaacttagagataaagttgatgataaatca
gaagatcaaactattcaaataagttctgaagataaaactgcatttacaaatgcaaaattt
gcacacctccatacacattctcaattttcaattttacaatcaacagcaagtatttctgac
attgtaaaagcaactataaagcataatatgcccgctgttgcattaaccgatggtggaaat
atgatgggagcattttattttgtaaaagaaatattagctcacaataaatcggttgaggaa
ttcaatgcgaaaatcggagatggtcaagtcaaaaaagaaataattacaccaattgttgga
agtcaatttaacgtatgtgttgaccatttagacaaaagccataaagacaatggatatcaa
attgtaatgctagccaaaaacaaaaaaggctatcacaatttagcaaaaatgtcttctatt
tcacacacaaaggggttctactatgtaccaagaattgacaaaaaagttgttgagcaatac
aaagaagatattataattttaagtggtaatatttatggtgaaatagcaagtaaaattcta
aatattggagaaaatcaagcagaagaagctttgttatggtggaaagaaaaatttaaagaa
gatttttatttagaaataaataatcatcaccaagaaaatgaaaaacatgtaaatgaaatt
ttacttaatttttcaaaaaaacatgatgtaaaattaatcgctaccaatgacacgttttac
atagataaaaatgatgcagatgcgcatgatattttactttgtgttaaagatggtgaaaaa
tttgacacaccaaaaggtagaggtcgtggctttagatatgggcttgataatgaagaatat
tattttaaaagccaagatgaaatgaaatccttatttaaggatattcctgaagctataata
aatattcaagaaatcgttgataaaattgagccctacccactcgcacgagatgtgctatta
ccgaaatttgatataccagagcaattcataaaacccgaagatgagattgatggaggtgta
agaggagaaaatgcctatttaagatatctaacatatgaaggtgctaaaaaaaggtatggt
gaagaactagatgaagatactattgagcgacttgatttcgaactatcaattatagaaaaa
actggatatccaggctattttttaattgtatgggatttaattgctgaagctcgaaaaatg
gacgtttcagttggtccaggtcgtggttcagctgctggttcagtagttgcatattgttta
tggattactaatatcgacccaataaaatacgacttgctttttgagcgattcttaaatcct
gatcgtgtatcacttcccgatattgatattgattttgatgatgaaggtagacaaagagtt
attgactttgtgattgataagtatggctcaaataatgttgcccaaattatcacctacgga
actatggctgcaaaatcatctattcgtgatacagcacgagttttagatttaccattacca
gacgcagatagaattgcaaaattaataccgaatactaaactgaattacattttcggtaca
gacacaaaaagtaaatctaaaattgccgaacttagatctgaagacaaagaaaatgttgct
gagttacaaaaaatttctgaaggtcatgaccttgccgcagaaacaattaaaaaagctctt
gcacttgaaggttctgttagaaatactggaacccatgcatgtggagttattattacacct
gaagacattaccaatttaatacctgtatctactgccaaagattcagatatgtttgttacc
caatttgacaacaacgtagttgaaagtgcgggattattaaaaatggattttttagggttg
aaaacattatccctaatcaaggatactgtcaaaattgtaaaggcaaaacatggcatagat
ttaattccggatgattttccattagatgatgaaaaaacatatgaactattccagcgagga
gaaacaataggtatttttcaatacgaatctccaggaatgcaaaaacacatgaagaattta
aaacctactgtttttgctgatttaattgctatgaatgcattgtatcgtccaggtccaatg
gaatatataccaagtttcattgctcgtaaacatggaactgaagatataacttatgatctt
ccagaaatggaagaattcctaaaagaaacatacggaattacagtttaccaagagcaagta
atgttactttctcaaaaattagccgattttaccaaaggtcaagccgatatgcttcgaaaa
gcaatgggtaaaaagatttttgctcttcttgaaaaactaaaaccactttttatggaaggt
ggtactaaaaatggacatcctgaagaaactttagaaaaaatttggaaagactgggaagca
tttgctgcatatgcctttaacaaatctcactcaacttgttatgcatacattgcatatcaa
actgcttatttaaaagctcattaccctgcagaatacatggcggcggtactttctaataat
atgcgagatattaaacaaattacattttttatggaagaatgtaaacgtgcaggaattaaa
gttttaggaccagatgttaatgaatcatattacaaatttgccgtaaataatgaaggtgct
attcgctttggaatgggagcaattaaaggtgttggagaaagtgctgttgaaacgattgtt
aatgaacgaaaagaaaacggttctttcaaatcaatttttgatgttgctaagcgtattgat
ttaagagctgcaaataaaagaacttttgaaggaatggtttttgctggtggctttgatagt
tttactgaaactcatagagcacaatatttcgccttagatgaaaaaggtcaaaccttttta
gagaaagcaataagatatggtgctaaatttcaagaaaatgctaattcatctcaagtatct
ttatttggagaaacttctgaaattcaacttccagaaccaataattcctgattgtgaagat
tggggaatgatggaaaaattatcaaaggaaaaagaagtagtaggaatttatatttctggc
catccattggatgattttaaaaacgaaataaactgtttctgcaatgctagtttgattgat
tttcaagacacaaaagctataatgaataaagatctctcaattgctggaattattacttca
gttgaacatcgagtttctaaaaacggaaaaggttgggccacttttataattgaagattat
accgctgctcatgaatttagaatgtttagtgaagaatatttaagacacaaacatttttta
gttccaaactcattcttatatgttaaaatagctgctagaaaaaactattataacgatgat
gtaagactacaatttacagatattcaactattacaagaaatattaggtaagttgtcaaaa
aaacttacaattcaattggacattcgagaattaaacaactctaaaattgctactttagat
agtattttcacaaacaacaaaggtgataaatcattacattttacagtttatgatacagat
gaaaaagtaaaattaaatcttccaagtcgaagcaataaagttgctattagcaacgaatta
cttagccttctcgacaaacaatctttaagttataaattaaattag
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