Urechidicola croceus: LPB138_08705
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Entry
LPB138_08705 CDS
T04497
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lul
Urechidicola croceus
Pathway
lul03030
DNA replication
lul03430
Mismatch repair
lul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB138_08705
03430 Mismatch repair
LPB138_08705
03440 Homologous recombination
LPB138_08705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lul03032
]
LPB138_08705
03400 DNA repair and recombination proteins [BR:
lul03400
]
LPB138_08705
Enzymes [BR:
lul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB138_08705
DNA replication proteins [BR:
lul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB138_08705
DNA repair and recombination proteins [BR:
lul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB138_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AOW20750
UniProt:
A0A1D8P856
LinkDB
All DBs
Position
1906102..1909092
Genome browser
AA seq
996 aa
AA seq
DB search
MYLNTHTYYSLRYGTIPIAMLLKLALQCNAMSLALTDINSTSVCLDFMRLASKHSIKPIV
GVDFRNGAQQQFIILARCNNGLQSINEYLSSLLHLDTFAVPKRAPKIPNTFVIYPYQNDV
ISLNSNEYIGVKPSDLNHLKFSKWNLKLDKLVILKTVSFENKKGFNTHRLLRAIDNNTLL
SKLPKTEQGEETDIMIPVEVLKEIYAEYPQIIQNTQNILERCNVQFDFDSNTPKNQKTYT
NNEELDYKLLRKLAYDGLHYRYKKIGKRVFDRLEKELKIIKEKQFVSYFLINWKILKYAR
SKQYYYVGRGSGANSVVAYLLRITDVDPIELDLYFERFINLYRTNPPDFDLDFSWRDRND
IMNFIFKQFKHTSLIAVYNTFKYKASVRELGKVFGLPKAEIDKLSNRSFHVHQLDKLSKL
VLIYSENIKGFPNYLGLHAGGILISEKPIHCYSATFLPPKGFSTVMFDMVVAEDIGLYKF
DILSQRGLGKIRETVDIVKYNHPTHPAIDIHDIKRFKEDAKIKYLLRYAKAIGCFYVESP
AMRMLLKKLQVDNYLGLVAASSVIRPGVSKSGMMREYIQRYRKPERRKDAHPILLDIMPE
TYGVMVYQEDVIKVAHYFGGLSLGEADMLRRGMSGKFRSRDEFLKVKNQFFENCKIKGHS
VELTTEIWRQIESFAGYAFAKGHSASYAVESYQSLFLKAYYPLEYMVATLNNFGGFYRPE
YYIHEARMNGGIIHSVHVNKSYHQNYIEEKTIFLGFMMLHSFELKNAEKIVLERTKNGLF
LDLDDFIDRVAISLQQVAILIKVNAFSFTGRKKRELLWEAHMKVNNVATSHHIQTLFKTK
TVSFETPKLNCNDYEDAFDEIEYYGFPLCNPFELLVQRNLNSTVTTVVENVVKPLQREVG
NVATVYGYYVTAKRTYTSKGDTMYFGTFVDIQGNHIDTVHFPPVAKKFPFRGKGVYKLIG
KVVEEFDCISIEILEMHKLPIIEDPRYSDTSKKITT
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaaatacacatacatattacagtctgagatatggtactattcccattgcaatg
ttattaaaattagcattgcaatgcaatgcaatgtcattagcattgactgatattaacagc
acctctgtatgcttagattttatgcgtttagccagcaaacatagtatcaaacctatcgtt
ggagttgattttaggaatggtgctcaacagcaatttattatacttgcaaggtgcaataat
ggcttgcaatccattaatgaatacttatcatccttattgcatttagatacttttgcagtt
ccaaaaagagcacctaaaattccaaatacatttgttatttatccgtaccaaaatgacgtg
atttcgttaaatagcaatgaatatattggtgtaaaaccttctgatttgaatcatttgaaa
ttttctaaatggaacttgaaattggataaattagtcatcttaaaaacggtatcatttgaa
aataaaaaagggtttaatacacatcgattgttaagagctatcgacaataatacattgtta
agtaaattaccaaaaacggaacaaggagaagaaactgacatcatgattcctgtagaagtt
ttaaaagaaatttatgctgaatatcctcaaattattcaaaacacacaaaatattttagaa
cgttgcaacgtacaatttgattttgattcaaacacgcctaaaaaccaaaaaacatataca
aataacgaagaattagattacaaattattaagaaaattagcctatgatgggttgcactat
cgttataaaaaaattggcaaacgtgttttcgacagacttgaaaaggaattaaaaatcatc
aaagaaaaacaatttgtttcctattttcttattaattggaaaatactaaagtatgcacgt
agtaaacagtattattatgtaggtcgtggtagtggagcaaatagtgttgttgcctattta
ttgagaattacagatgttgatccaattgaacttgatttatactttgaacgcttcattaat
ttatacagaaccaatccaccagattttgatttggatttctcatggagagaccgaaatgat
attatgaatttcatttttaaacaatttaaacacacatctctgattgcagtatacaatact
ttcaaatacaaagcatctgttcgagaattaggtaaagtctttgggttaccaaaagcagag
attgacaaactttctaataggagttttcatgttcatcagttggataaactttcaaaactg
gtattgatttatagtgaaaatattaaagggtttccaaactatttaggtttgcatgcagga
ggaatattaatatccgaaaaacctatccattgttattcagcaacgttcttacctccaaaa
ggattttcaacggtcatgtttgatatggttgttgcagaagatattggattgtacaaattt
gatattctaagtcaacgaggtttgggtaaaattcgtgaaacggtagatatagttaaatac
aaccatcctacacatcctgcaattgatattcatgatatcaaacgctttaaagaagatgct
aaaatcaaatatttattacgctacgctaaagcaattggatgtttctatgtcgaatctcct
gccatgcgcatgcttttaaaaaaattgcaagtcgataattatttaggcttggtagctgca
agttcagtcataagaccaggagtttcaaaatctggaatgatgcgagaatacattcaacgt
tacagaaaaccagaacgaagaaaagatgctcatcctattttattagatatcatgcctgaa
acttatggagtgatggtatatcaagaagatgtgattaaagtagcacattattttggtgga
ttaagtttaggagaagcggatatgttacgtcgagggatgagtggaaaatttaggtcaaga
gatgaatttttaaaagtcaaaaatcagttttttgaaaattgtaaaattaaaggtcatagt
gttgaattgacaactgaaatatggcgacaaatagaaagttttgctggctatgcatttgcc
aaaggacattctgcttcctatgcagttgaaagttatcagagtttgtttttaaaagcctat
taccctttagaatatatggttgcaacactcaataattttggtggtttttaccgtccagaa
tattacatccatgaagcacgtatgaatggaggaattattcattctgttcatgtaaataaa
tcctatcatcaaaattatattgaagagaaaactatttttttaggatttatgatgttgcat
tcctttgaacttaaaaatgcagaaaaaatagtattggaaagaacaaaaaatggattgttt
ttagatttagatgatttcattgatcgcgttgcaatatcattgcaacaggttgcaattttg
ataaaagtgaatgccttctcatttacaggaagaaaaaaaagagagttgctatgggaagca
catatgaaagttaacaacgttgcaacgtctcatcacattcaaacattattcaaaacaaaa
acggtttcttttgaaactccgaaattgaattgcaacgactatgaagatgcctttgatgag
atagaatactatggtttcccattatgcaatccctttgaattactagtgcaacgcaattta
aactcgaccgttacaacggtagtggaaaacgttgtaaaaccgttgcaacgtgaagttgga
aacgttgcaacggtttatggatactatgtaactgcaaagagaacctatacttctaaagga
gatactatgtattttggaacgttcgtagatatccaaggaaatcatattgatactgttcac
ttccctcctgttgcaaaaaagtttccatttcgtggaaaaggagtttataaactaattgga
aaagttgtagaagagtttgattgtatttctattgagatacttgaaatgcacaaacttcca
attattgaagatccaaggtattctgatacatcaaaaaaaataacaacatga
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