Urechidicola croceus: LPB138_13740
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Entry
LPB138_13740 CDS
T04497
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lul
Urechidicola croceus
Brite
KEGG Orthology (KO) [BR:
lul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lul03032
]
LPB138_13740
03400 DNA repair and recombination proteins [BR:
lul03400
]
LPB138_13740
Enzymes [BR:
lul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPB138_13740
DNA replication proteins [BR:
lul03032
]
Prokaryotic type
DNA Topoisomerases
LPB138_13740
DNA repair and recombination proteins [BR:
lul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPB138_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PL28
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AOW21676
UniProt:
A0A1D8PAU9
LinkDB
All DBs
Position
3103272..3105755
Genome browser
AA seq
827 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFQVESSFGHIADLPSKELGINVEGDFMPKYTVSTDK
KAVVKKLKDLAKKADTVWLASDEDREGEAIAWHLYEQLKLKEEQTKRIVFHEITKGAILK
AVENPRSINYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVAVRLIVERER
EIQNFETKASYRIDAEFVNKEGKKFKAKLPKNFESRTKAEAFLNSCIGTEFSISDLKKTP
AKKTPAAPFTTSTLQQEASRKLYFPVAKTMMMAQRLYEAGLITYMRTDSVNLSKDAKEAT
QAEIISSYGEKYSKPRNFKTKAKGAQEAHEAIRPTTMSQQSISVDYDQDRLYDLIWKRTI
ASQMSDAQLERTNIKVENSTNDKIFTASGQMIKFDGFLKVYLEGTDNDDDEQDGMLPTLT
VGELLKNNYITATERYTQPPYRFTEASLVKQLEELGIGRPSTYAPTISTVQNRGYVEKGT
IEGIERNYVQLKLKGNEVNSKKLTEKVGSDKGKLVPTDIGNIVNDFLVANFDNVLDYGFT
AKVESDFDDIAEGKEDWTTVIRDFYKDFHSTVEYVAENAERESGERILGDHPETGRTVLV
RLGKFGPMVQIGDREDEDKIFASLQPDQNLGTITLEEALDLFLLPKTVGNFEEEEVIISN
GRFGPYIRFGKMFVSLPKGENPLEVDFERAVELIKEKQKADAPIAEYENMPVQKGVGRFG
PFIKWNNIFINVNKKYDFDNLTFDNIVELIETKKQKDIDKVIHNWEEEGIRVEKARWGRF
NVIKGKIKIELPKTTEAEKLTLEEVKSMIEKKTPKKKTARKKTTKKK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagttgagtcaccggcaaaagccaaaacaatagaaaaattt
cttggaaaagattttcaagtagagtcaagttttggacatattgctgacttaccatcaaag
gaattagggataaatgtagagggagattttatgccaaagtatacagtttcaactgataaa
aaagcagttgttaagaaactgaaagatttagcaaaaaaagcagatactgtttggttagca
agtgatgaagatcgagaaggagaagctatcgcttggcatttatacgaacaattaaaatta
aaggaagagcaaacgaaacgtattgtttttcatgagattaccaaaggagcaattttaaaa
gcagttgaaaacccaagaagtatcaattataatttagttaatgctcagcaagcaagaaga
gtattagatagattagttggttatgaactttcaccagtattatggaggaaagttaaagga
ggtttgtctgcaggtcgagttcagtcagttgccgttcggttaattgttgagagagaacgt
gaaattcaaaattttgagacaaaggcatcttatagaattgatgctgaatttgtaaataaa
gaaggtaaaaaatttaaagccaaactgccaaagaactttgaatcaagaactaaagctgaa
gcatttttaaattcatgtattggaacagagttttcaatttcagatttaaaaaagactcca
gcaaagaaaactccagcagcaccatttacaacatctacattgcagcaagaagcatctagg
aaattgtattttccggttgctaaaactatgatgatggcacagcgcttatatgaagctggt
ttgattacatatatgagaactgatagtgtaaatctttctaaagatgccaaagaagctact
caggctgaaattatttcttcatatggagagaagtatagtaaaccaagaaattttaaaacg
aaagcaaaaggtgcgcaagaagcacatgaggctattcgtccaacaaccatgagtcaacaa
tccatatcagtagattatgatcaagatagattatatgatttgatatggaagcgaacaatc
gcctcgcaaatgagtgatgctcagttagaaagaaccaatattaaggtagagaattctaca
aatgataagatttttacagcaagtggacaaatgattaaatttgatggtttcttaaaagtt
tatctagaaggaactgataatgatgatgatgagcaagatggaatgttaccaacacttaca
gtaggtgaacttttaaagaataactacattacagcaactgaacgttacacacaacctcca
tatcgatttactgaggcatcattggttaagcaattagaagaactaggtattggtcgccca
tcaacttatgcaccaactatttcaacagttcaaaatagaggatatgttgagaaaggtaca
attgaaggtattgaaagaaattatgttcaattaaaattaaaaggcaatgaggttaattct
aaaaaattaactgaaaaagtaggttcagataagggaaaattggtacctactgatatagga
aatatagtgaatgactttttagttgctaattttgacaatgttcttgattatggctttaca
gccaaggtagaaagcgattttgatgatatagctgaaggtaaagaagattggacaacagta
ataagagatttttataaagattttcattcaactgttgaatacgttgccgaaaatgcagaa
agagaatctggtgaacgtattttaggtgatcatccagaaacaggaagaaccgtattagtt
cgtttaggtaaatttgggccgatggttcaaattggtgatagagaagatgaagataaaatt
tttgccagtttacaaccagatcaaaatttaggaacaattacattagaagaagctttagac
ctatttttattgccaaagactgttggaaattttgaagaagaagaagtaataatttcaaat
ggtagatttggaccatatattcgttttggaaaaatgtttgtttcactaccaaaaggtgaa
aacccattagaagtggactttgaaagagctgtggagttgataaaagaaaagcaaaaagct
gatgcgccaattgctgaatatgaaaacatgccagttcaaaaaggagtagggcgttttgga
ccttttattaaatggaataacatatttatcaatgtaaacaagaaatatgactttgataat
ttaacatttgataatattgttgaattaattgaaactaaaaagcaaaaggatattgataaa
gtaattcataattgggaagaagaaggaattagagttgaaaaagctcgttggggtagattt
aatgtaatcaaaggaaagataaagattgaattgccaaaaacaacagaagcagaaaaattg
actttggaagaggtgaaatcaatgatagagaaaaaaacgccaaagaagaaaacagcaaga
aaaaaaacaacaaaaaagaaataa
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