Urechidicola croceus: LPB138_14525
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Entry
LPB138_14525 CDS
T04497
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lul
Urechidicola croceus
Pathway
lul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB138_14525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lul03021
]
LPB138_14525
03400 DNA repair and recombination proteins [BR:
lul03400
]
LPB138_14525
Enzymes [BR:
lul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB138_14525
Transcription machinery [BR:
lul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB138_14525
DNA repair and recombination proteins [BR:
lul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB138_14525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AOW21822
UniProt:
A0A1D8PB70
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All DBs
Position
3280712..3281704
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSIRIE
GVEHEFSTIKGIVEDVTEIILNLKQVRFKKQIDDTDKETVNVKISDQGQLTAGDLQKYIS
GFQVLNPDLVICNMEKSVNLQFELSIEKGRGFVPAEENKKSGAALGTIFTDSIYTPIKNV
KYAVENFRVEQKTDYEKLVFDIVTDGSISPQDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVHVKGLSFGMDLSKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcaaaagcccgataaagtaataatgattgattctactgatttt
gaaggtagatttgaattcagacctttagaaccaggatttggtttaacagtagggaatgca
ttaagaagagtattactttcatctttagaaggatttgcaataacatcaattcgtattgaa
ggagttgaacatgaattttctacaatcaaaggaattgttgaagatgttacagaaatcatt
cttaacttaaaacaagttcgttttaaaaagcaaattgacgatactgataaagaaacagtt
aatgttaaaatatctgatcaaggtcaattaacagcaggtgatttacaaaaatatatttca
ggttttcaagtattaaatccagatttagttatctgtaatatggaaaaatctgtgaattta
caatttgaactttctattgaaaaaggtagaggattcgtaccagctgaagaaaataaaaaa
tctggagctgctttaggaacaatatttacagattcaatttacactccaataaagaatgta
aaatatgctgtagaaaatttccgtgtagagcaaaaaaccgattatgaaaaattagttttt
gatattgtgactgatggatcaatcagcccacaagatgctttaactgaagctgcaaaaatt
ttaattcaccacttcatgttgttttcagatgagagaattactttagaagctgatgaaatt
gctcaaactgaaacatatgatgaagagtcattacatatgagacaattgcttaaaactaag
ttaattgatatggatttatcagtaagagcattaaattgtttaaaagctgcagaagttgat
accttaggtgatttggtatcattcaataaaaatgacttaatgaagttccgtaatttcgga
aaaaaatctttaacagaattagatgaactagttcatgtaaaaggtttaagtttcggtatg
gatttgagcaagtataaactagataaagaataa
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