Luteimonas chenhongjianii: CNR27_04280
Help
Entry
CNR27_04280 CDS
T05077
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lum
Luteimonas chenhongjianii
Pathway
lum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNR27_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lum03019
]
CNR27_04280
Enzymes [BR:
lum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNR27_04280
Messenger RNA biogenesis [BR:
lum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNR27_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RhlB
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
ATD66759
UniProt:
A0A290XCD8
LinkDB
All DBs
Position
953105..954868
Genome browser
AA seq
587 aa
AA seq
DB search
MSDKPLTDITFSSFDLHPALLAGLEEAGFTRCTPIQALTLPLALAGRDVAGQAQTGTGKT
LAFLVAVINRLLSKPALADRKPEDPRALILAPTRELAIQIHKDAVKFGSHLGLKFALVYG
GVDYDKQRQILTEGADVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVESEFITNAKVRQVMYFPA
DDEKLQLLLGLLSRSEGARTMVFVNTKAFIERVARALEKAGYRVGVLSGDVPQKKRESLL
KKFQAGQLELLVATDVAARGLHIDGVSHVFNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAQSLPEIEAYIEQKIPVEPVTAELLTALPRKPREGVELDPEDGESIGEIFKEVRE
ARAVEDAKRGGGRSAGGGRGAGGGRSGPGARAAGSEGRGERGPRKPRRRPEDAAAEAAPA
APAAAAAPVIDAAAAVAQATPDESRPPRKPRRRRGGKKVEGAPAPQPGVAAAAEAPAKPR
GDAGKGPREVRPTQRPATTTPKADMAPSLLSRIGRGLRRLVSGGDTR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcctcttaccgacatcaccttctcgtccttcgacctgcatccggcgttg
cttgccgggctggaagaggccgggttcacccgctgcacgccgatccaggcgctgacgctg
ccgctggcgctcgccggccgcgacgtcgccggccaggcccagaccggcaccggcaagacc
ctggcgttcctggtcgccgtgatcaaccggctgttgtcgaagccggcgctggccgaccgc
aagccggaagacccgcgcgcgctgatcctcgcgccgacccgcgaactcgccatccagatc
cacaaggacgcggtgaagttcggcagccacctcgggttgaagttcgccctggtctacggc
ggcgtggactacgacaagcagcggcagatcctcaccgagggcgccgacgtcatcatcgcg
acccccggccgtctgatcgactacgtcaagcagcacaaggtcgtcagcctgcacgcctgc
gagatctgcgtgctcgacgaagccgaccgcatgttcgacctcggtttcatcaaggacatc
cgcttcctgctgcggcgcatgccgatccgtaccgagcggcagacgctgctgttctcggcg
acgctgagccaccgcgtgctcgagctcgcctacgagcacatgaacgagccggagaagctg
gtcgtcgaaagcgagttcatcaccaatgccaaggtccggcaggtgatgtacttccccgcc
gacgacgagaagctgcagcttctgctgggcctgctctcgcgcagcgagggtgcgcgcacg
atggtgttcgtcaataccaaggcgttcatcgagcgggtcgcgcgggcgctggagaaggcc
ggctaccgcgtcggcgtgctgtctggcgatgtgccgcagaagaagcgcgagagcctgctg
aagaagttccaggccggccagctcgaactgctggtggccaccgatgtcgccgcccgcggc
ctgcacatcgacggcgtcagccatgtcttcaactacgacctgccgttcgatgccgaggac
tacgtgcaccgcatcggccgcaccgcgcgcctgggcgccgagggtgacgcgatcagcttc
gcctgcgagcgctatgcgcagagcctgcccgagatcgaggcctacatcgaacagaagatc
ccggtggagccggtcaccgcggagttgctgaccgcgttgccgcgcaagccgcgcgagggc
gtcgaactcgatcccgaggacggcgagagcatcggcgagatcttcaaggaagtgcgcgag
gcccgcgcggtcgaggatgccaagcgtggtggcggtcgcagtgctggcggcggccgcggt
gccggtggcggccgcagtggtcccggcgcgcgcgcggcgggcagcgagggccgtggcgag
cgcggaccgcgcaagccgcgtcgccggcctgaagacgccgcagccgaggctgcgcccgct
gcgccggccgcagcagcggcgcccgtcatcgatgccgcggctgcagtcgcccaggcgacg
ccggacgaatcgcgtccgccgcgcaagccgcgccgccggcgtggcggcaagaaggtcgag
ggtgcgcccgcgccgcagcccggtgtggccgcagccgccgaagcgccggcgaagccgcgt
ggcgatgccggcaagggtccgcgtgaagtgcgtccgacccagcggccggcgacgaccacg
ccgaaggccgacatggcgccatcgctgctcagccgcatcggtcgcgggctgcgtcgtctg
gtctcaggtggcgacacgcgctga
DBGET
integrated database retrieval system