KEGG   Luteimonas chenhongjianii: CNR27_04280
Entry
CNR27_04280       CDS       T05077                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
lum  Luteimonas chenhongjianii
Pathway
lum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNR27_04280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lum03019]
    CNR27_04280
Enzymes [BR:lum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CNR27_04280
Messenger RNA biogenesis [BR:lum03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CNR27_04280
SSDB
Motif
Pfam: DEAD Helicase_C RhlB ResIII Helicase_C_2
Other DBs
NCBI-ProteinID: ATD66759
UniProt: A0A290XCD8
LinkDB
Position
953105..954868
AA seq 587 aa
MSDKPLTDITFSSFDLHPALLAGLEEAGFTRCTPIQALTLPLALAGRDVAGQAQTGTGKT
LAFLVAVINRLLSKPALADRKPEDPRALILAPTRELAIQIHKDAVKFGSHLGLKFALVYG
GVDYDKQRQILTEGADVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVESEFITNAKVRQVMYFPA
DDEKLQLLLGLLSRSEGARTMVFVNTKAFIERVARALEKAGYRVGVLSGDVPQKKRESLL
KKFQAGQLELLVATDVAARGLHIDGVSHVFNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAQSLPEIEAYIEQKIPVEPVTAELLTALPRKPREGVELDPEDGESIGEIFKEVRE
ARAVEDAKRGGGRSAGGGRGAGGGRSGPGARAAGSEGRGERGPRKPRRRPEDAAAEAAPA
APAAAAAPVIDAAAAVAQATPDESRPPRKPRRRRGGKKVEGAPAPQPGVAAAAEAPAKPR
GDAGKGPREVRPTQRPATTTPKADMAPSLLSRIGRGLRRLVSGGDTR
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgagcgacaagcctcttaccgacatcaccttctcgtccttcgacctgcatccggcgttg
cttgccgggctggaagaggccgggttcacccgctgcacgccgatccaggcgctgacgctg
ccgctggcgctcgccggccgcgacgtcgccggccaggcccagaccggcaccggcaagacc
ctggcgttcctggtcgccgtgatcaaccggctgttgtcgaagccggcgctggccgaccgc
aagccggaagacccgcgcgcgctgatcctcgcgccgacccgcgaactcgccatccagatc
cacaaggacgcggtgaagttcggcagccacctcgggttgaagttcgccctggtctacggc
ggcgtggactacgacaagcagcggcagatcctcaccgagggcgccgacgtcatcatcgcg
acccccggccgtctgatcgactacgtcaagcagcacaaggtcgtcagcctgcacgcctgc
gagatctgcgtgctcgacgaagccgaccgcatgttcgacctcggtttcatcaaggacatc
cgcttcctgctgcggcgcatgccgatccgtaccgagcggcagacgctgctgttctcggcg
acgctgagccaccgcgtgctcgagctcgcctacgagcacatgaacgagccggagaagctg
gtcgtcgaaagcgagttcatcaccaatgccaaggtccggcaggtgatgtacttccccgcc
gacgacgagaagctgcagcttctgctgggcctgctctcgcgcagcgagggtgcgcgcacg
atggtgttcgtcaataccaaggcgttcatcgagcgggtcgcgcgggcgctggagaaggcc
ggctaccgcgtcggcgtgctgtctggcgatgtgccgcagaagaagcgcgagagcctgctg
aagaagttccaggccggccagctcgaactgctggtggccaccgatgtcgccgcccgcggc
ctgcacatcgacggcgtcagccatgtcttcaactacgacctgccgttcgatgccgaggac
tacgtgcaccgcatcggccgcaccgcgcgcctgggcgccgagggtgacgcgatcagcttc
gcctgcgagcgctatgcgcagagcctgcccgagatcgaggcctacatcgaacagaagatc
ccggtggagccggtcaccgcggagttgctgaccgcgttgccgcgcaagccgcgcgagggc
gtcgaactcgatcccgaggacggcgagagcatcggcgagatcttcaaggaagtgcgcgag
gcccgcgcggtcgaggatgccaagcgtggtggcggtcgcagtgctggcggcggccgcggt
gccggtggcggccgcagtggtcccggcgcgcgcgcggcgggcagcgagggccgtggcgag
cgcggaccgcgcaagccgcgtcgccggcctgaagacgccgcagccgaggctgcgcccgct
gcgccggccgcagcagcggcgcccgtcatcgatgccgcggctgcagtcgcccaggcgacg
ccggacgaatcgcgtccgccgcgcaagccgcgccgccggcgtggcggcaagaaggtcgag
ggtgcgcccgcgccgcagcccggtgtggccgcagccgccgaagcgccggcgaagccgcgt
ggcgatgccggcaagggtccgcgtgaagtgcgtccgacccagcggccggcgacgaccacg
ccgaaggccgacatggcgccatcgctgctcagccgcatcggtcgcgggctgcgtcgtctg
gtctcaggtggcgacacgcgctga

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